Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Delftia acidovorans SPH-1

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Comamonadaceae
Under regulation:
- Genes 11
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -390
Score: 54.4
Sequence: GCTCTGCTCCGGGGT...
Locus tag: Daci_2313
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC
Thiamin biosynthesis protein ThiC

Position: -79
Score: 23.4
Sequence: TGCCGCGCAGCGCCC...
Locus tag: Daci_3293
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Daci_3292
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Daci_3291
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Daci_3290
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiO
Glycine oxidase ThiO (EC 1.4.3.19)
thiS
Sulfur carrier protein ThiS
thiG
Thiazole biosynthesis protein ThiG
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -160
Score: 45.7
Sequence: GCCCTCCGCTCCGGG...
Locus tag: Daci_4530
Name: PF04443
Funciton: Acyl-protein synthetase, LuxE
Locus tag: Daci_4529
Name: PF05893
Funciton: putative acyl-CoA reductase
Locus tag: Daci_4528
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: Daci_4527
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Daci_4526
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Daci_4525
Name: oarX
Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
PF04443
Acyl-protein synthetase, LuxE
PF05893
putative acyl-CoA reductase
thiZ
Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
oarX
Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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