Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Ruminococcus lactaris ATCC 29176

Properties
Regulator type: Transcription factor
TF locus tag: RUMLAC_00443
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -170
Score: 4.5
Sequence: GAGAACGTATGTTCAT
Position: -129
Score: 5.1
Sequence: CCGAACAGATGTTTGT
Position: -92
Score: 5
Sequence: TCGAACATATTTTCGC
Locus tag: RUMLAC_00443
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -32
Score: 5.1
Sequence: ACGAACAACTGTTCGA
Locus tag: RUMLAC_01907
Name: recA
Funciton: Recombination protein A
Locus tag: RUMLAC_01908
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -130
Score: 5
Sequence: AAGAACATACGTTCTA
Locus tag: RUMLAC_00163
Name: umuC
Funciton: DNA polymerase V involved in DNA-repair
Locus tag: RUMLAC_00162
Name: BACPEC_01776
Funciton: hypothetical protein
umuC
DNA polymerase V involved in DNA-repair
BACPEC_01776
hypothetical protein

Position: -59
Score: 4.6
Sequence: GAGAACGTTTGTTCTA
Locus tag: RUMLAC_02126
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: RUMLAC_02127
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -118
Score: 5
Sequence: GCGAAAATATGTTCGA
Position: -81
Score: 5.1
Sequence: ACAAACATCTGTTCGG
Position: -40
Score: 4.5
Sequence: ATGAACATACGTTCTC
Locus tag: RUMLAC_00444
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD