Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Ruminococcus gnavus ATCC 29149

Properties
Regulator type: Transcription factor
TF locus tag: RUMGNA_01924
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -83
Score: 5.1
Sequence: CCAAACAAATGTTTGA
Locus tag: RUMGNA_01924
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -37
Score: 4.8
Sequence: GCGAACAACTGTTCGG
Locus tag: RUMGNA_01745
Name: recA
Funciton: Recombination protein A
Locus tag: RUMGNA_01746
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -75
Score: 4.5
Sequence: GCAAACATACTTTCGA
Locus tag: RUMGNA_00081
Name: umuC
Funciton: DNA polymerase V involved in DNA-repair
Locus tag: RUMGNA_00080
Name: BACPEC_01776
Funciton: hypothetical protein
umuC
DNA polymerase V involved in DNA-repair
BACPEC_01776
hypothetical protein

Position: -62
Score: 5
Sequence: GCAAACATATGTTCTG
Position: -30
Score: 5.2
Sequence: AAGAACATATGTTCTG
Locus tag: RUMGNA_00361
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: RUMGNA_00360
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -89
Score: 5
Sequence: ACAAACATACGTTCTG
Position: -51
Score: 5.1
Sequence: AAGAACGTATGTTCTT
Locus tag: RUMGNA_01921
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD