Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Dorea formicigenerans ATCC 27755

Properties
Regulator type: Transcription factor
TF locus tag: DORFOR_01560
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 6
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -287
Score: 5.2
Sequence: TCGAACTTTTGTTCGT
Position: -259
Score: 4.8
Sequence: TCGAACAGTTGTTTGG
Position: -219
Score: 4.9
Sequence: CCGAACATATTTTCTA
Locus tag: DORFOR_01560
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -38
Score: 5.1
Sequence: CCGAACATTCGTTCGG
Locus tag: DORFOR_01417
Name: recA
Funciton: Recombination protein A
Locus tag: DORFOR_01418
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -71
Score: 5.3
Sequence: TCGAACAAATGTTCTT
Position: -45
Score: 4.6
Sequence: CAGAACAGATGTTTGC
Locus tag: DORFOR_00795
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: DORFOR_00794
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -168
Score: 4.9
Sequence: TAGAAAATATGTTCGG
Position: -128
Score: 4.8
Sequence: CCAAACAACTGTTCGA
Position: -100
Score: 5.2
Sequence: ACGAACAAAAGTTCGA
Locus tag: DORFOR_01559
Name: DORFOR_01559
Funciton: hypothetical protein
DORFOR_01559
hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD