Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Clostridium scindens ATCC 35704

Properties
Regulator type: Transcription factor
TF locus tag: CLOSCI_00491
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 6
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -129
Score: 4.8
Sequence: GAAAACATTTGTTTGT
Position: -81
Score: 4.8
Sequence: TCGAACGCATGTTTGT
Position: -44
Score: 4.9
Sequence: TCGAACATATTTTCTA
Locus tag: CLOSCI_00491
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -38
Score: 5
Sequence: ACGAACGTTCGTTCGA
Locus tag: CLOSCI_01391
Name: recA
Funciton: Recombination protein A
Locus tag: CLOSCI_01392
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -66
Score: 5.4
Sequence: AAGAACATATGTTTGT
Position: -37
Score: 5.1
Sequence: ACAAACGTATGTTCTT
Locus tag: CLOSCI_01206
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: CLOSCI_01207
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -141
Score: 4.9
Sequence: TAGAAAATATGTTCGA
Position: -104
Score: 4.8
Sequence: ACAAACATGCGTTCGA
Position: -56
Score: 4.8
Sequence: ACAAACAAATGTTTTC
Locus tag: CLOSCI_00492
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD