Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Clostridium nexile DSM 1787

Properties
Regulator type: Transcription factor
TF locus tag: CLONEX_01664
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 6
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -19
Score: 5.2
Sequence: ACGAACATAAGTTCGC
Locus tag: CLONEX_03018
Name: recA
Funciton: Recombination protein A
Locus tag: CLONEX_03017
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -163
Score: 4.9
Sequence: CCGAACAACTGTTCTT
Position: -130
Score: 5.2
Sequence: AAGAACAAATGTTTGT
Position: -94
Score: 5
Sequence: ACGAACATATTTTCTA
Locus tag: CLONEX_01664
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -67
Score: 4.6
Sequence: GCAAACATCTGTTCTG
Locus tag: CLONEX_00280
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: CLONEX_00279
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -126
Score: 5
Sequence: TAGAAAATATGTTCGT
Position: -90
Score: 5.2
Sequence: ACAAACATTTGTTCTT
Position: -57
Score: 4.9
Sequence: AAGAACAGTTGTTCGG
Locus tag: CLONEX_01663
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD