Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Clostridium bolteae ATCC BAA-613

Properties
Regulator type: Transcription factor
TF locus tag: CLOBOL_03828
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 12
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -46
Score: 4.5
Sequence: CAGAACGTCTGTTCTT
Position: -8
Score: 5.1
Sequence: CAGAACAAATGTTTGT
Locus tag: CLOBOL_03828
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -8
Score: 5.2
Sequence: AAGAACAAATGTTCTT
Position: 50
Score: 4.7
Sequence: GCAAACATACGTTCTG
Locus tag: CLOBOL_04661
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: CLOBOL_04660
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -8
Score: 4.9
Sequence: GAGAACATTTGTTCGC
Locus tag: CLOBOL_02320
Name: recA
Funciton: Recombination protein A
Locus tag: CLOBOL_02319
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -122
Score: 5.3
Sequence: AAGAACAAATGTTCGA
Locus tag: CLOBOL_00438
Name: umuC
Funciton: DNA polymerase V involved in DNA-repair
Locus tag: CLOBOL_00437
Name: BACPEC_01776
Funciton: hypothetical protein
umuC
DNA polymerase V involved in DNA-repair
BACPEC_01776
hypothetical protein

Position: -160
Score: 5.1
Sequence: ACAAACATTTGTTCTG
Position: -122
Score: 4.5
Sequence: AAGAACAGACGTTCTG
Locus tag: CLOBOL_03827
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain

Position: -8
Score: 5.1
Sequence: ACAAACAAATGTTCTG
Locus tag: CLOBOL_06773
Name: GNAT
Funciton: GCN5-related N-acetyltransferase
Locus tag: CLOBOL_06771
Name: COG4422
Funciton: Bacteriophage protein gp37
GNAT
GCN5-related N-acetyltransferase
COG4422
Bacteriophage protein gp37

Position: -34
Score: 5.1
Sequence: TAGAACATATGTTCTG
Locus tag: CLOBOL_04045
Name: PS51257
Funciton: hypothetical protein
Locus tag: CLOBOL_04044
Name: unuC2
Funciton: DNA polymerase V involved in DNA-repair
PS51257
hypothetical protein
unuC2
DNA polymerase V involved in DNA-repair
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD