Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Bryantella formatexigens DSM 14469

Properties
Regulator type: Transcription factor
TF locus tag: BRYFOR_04022
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Clostridia-3
Statistics of regulated genes:
- Genes 7
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 102 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -31
Score: 5.5
Sequence: ACGAACATAAGTTCGT
Locus tag: BRYFOR_02052
Name: recA
Funciton: Recombination protein A
Locus tag: BRYFOR_02053
Name: recX
Funciton: regulatory protein RecX
recA
Recombination protein A
recX
regulatory protein RecX

Position: -48
Score: 5.1
Sequence: TCGAACGAATGTTCTT
Locus tag: BRYFOR_02062
Name: umuC
Funciton: DNA polymerase V involved in DNA-repair
Locus tag: BRYFOR_02063
Name: BACPEC_01776
Funciton: hypothetical protein
umuC
DNA polymerase V involved in DNA-repair
BACPEC_01776
hypothetical protein

Position: -123
Score: 5.1
Sequence: TCGAACATAAGTTCTA
Position: -98
Score: 4.9
Sequence: CAGAACTTATGTTCTT
Locus tag: BRYFOR_02389
Name: COG4277
Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: BRYFOR_02390
Name: BACPEC_02112
Funciton: Uracil-DNA glycosylase, family 1
COG4277
Predicted DNA-binding protein with the Helix-hairpin-helix motif
BACPEC_02112
Uracil-DNA glycosylase, family 1

Position: -186
Score: 5
Sequence: TCGAAAATTTGTTCGA
Position: -160
Score: 4.8
Sequence: ACAAACATCTGTTCTG
Locus tag: BRYFOR_04038
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476
Peptidoglycan-binding lysin domain
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD