Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Glycine in Paracoccus denitrificans PD1222

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Regulog: Glycine - Rhodobacterales
Under regulation:
- Genes 4
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -223
Score: 57.6
Sequence: AGGTCGGAAATCGGG...
Position: -130
Score: 23.2
Sequence: GCTCTGGAGAGAGGC...
Locus tag: Pden_2348
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Pden_2347
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Pden_2346
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
Glycine cleavage system H protein
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)

Position: -211
Score: 48.4
Sequence: ACAGGAGAGTCGGGT...
Position: -141
Score: 64.3
Sequence: GGACCGCCACTCTGG...
Locus tag: Pden_0183
Name: dadA
Funciton: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
dadA
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD