Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CtsR in Pediococcus pentosaceus ATCC 25745

Properties
Regulator type: Transcription factor
TF locus tag: PEPE_1428
Regulator family: CtsR
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: CtsR - Lactobacillaceae
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 44 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -107
Score: 6
Sequence: AGATGTCTGACCAAATTTGACTAT
Locus tag: PEPE_0894
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: PEPE_0895
Name: grpE
Funciton: Heat shock protein GrpE
Locus tag: PEPE_0896
Name: dnaK
Funciton: Chaperone protein DnaK
Locus tag: PEPE_0897
Name: dnaJ
Funciton: Chaperone protein DnaJ
hrcA
Heat shock response transcriptional regulator HrcA, HrcA family
grpE
Heat shock protein GrpE
dnaK
Chaperone protein DnaK
dnaJ
Chaperone protein DnaJ

Position: -38
Score: -0.6
Sequence: ATAGTCAACATTAGTCAGAGTATA
Locus tag: PEPE_1428
Name: ctsR
Funciton: Stress and heat shock response transcriptional regulator CtsR, CtsR family
Locus tag: PEPE_1427
Name: clpC
Funciton: ATP-dependent Clp protease ATP-binding subunit ClpC
ctsR
Stress and heat shock response transcriptional regulator CtsR, CtsR family
clpC
ATP-dependent Clp protease ATP-binding subunit ClpC

Position: -128
Score: -0.9
Sequence: TTGGTTAATAAAGGTCAAAAATAC
Locus tag: PEPE_0420
Name: groS
Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: PEPE_0421
Name: groL
Funciton: Heat shock protein 60 family chaperone GroEL
groS
Heat shock protein 60 family co-chaperone GroES
groL
Heat shock protein 60 family chaperone GroEL

Position: -223
Score: -1.5
Sequence: ATGGTCAATATTGGTCAAACATCA
Locus tag: PEPE_0607
Name: clpE
Funciton: ATP-dependent Clp protease, ATP-binding subunit ClpE
clpE
ATP-dependent Clp protease, ATP-binding subunit ClpE

Position: -95
Score: 6.9
Sequence: AAATATTTGACCTTTTTTGACCAA
Locus tag: PEPE_0455
Name: clpP
Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
clpP
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD