Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CodY in Streptococcus suis 05ZYH33

Properties
Regulator type: Transcription factor
TF locus tag: SSU05_0350
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Streptococcaceae
Statistics of regulated genes:
- Genes 32
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 273 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -276
Score: 4.6
Sequence: AAGATTCTAAAAATT
Locus tag: SSU05_0121
Name: rpoB
Funciton: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Locus tag: SSU05_0122
Name: rpoC
Funciton: DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
rpoB
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
rpoC
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)

Position: -45
Score: 5.1
Sequence: AATTGTCAGACAATT
Locus tag: SSU05_0252
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Position: -74
Score: 5.3
Sequence: AATATTCTGATAATT
Locus tag: SSU05_0350
Name: codY
Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SSU05_0351
Name: pncA
Funciton: Nicotinamidase (EC 3.5.1.19)
codY
Nutrient limitation global transcriptional regulator CodY, CodY family
pncA
Nicotinamidase (EC 3.5.1.19)

Position: -54
Score: 5.2
Sequence: AATTGTCTGAATATT
Locus tag: SSU05_0665
Name: serC
Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
Locus tag: SSU05_0666
Name: yesJ
Funciton: Acetyltransferase (EC 2.3.1.-), GNAT family
Locus tag: SSU05_0667
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
serC
Phosphoserine aminotransferase (EC 2.6.1.52)
yesJ
Acetyltransferase (EC 2.3.1.-), GNAT family
serA
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Position: -173
Score: 5.1
Sequence: ATTTTTTTGAAAATT
Locus tag: SSU05_0279
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)

Position: -56
Score: 4.8
Sequence: AATTTTCTGTCAATT
Locus tag: SSU05_0281
Name: thrC
Funciton: Threonine synthase (EC 4.2.3.1)
thrC
Threonine synthase (EC 4.2.3.1)

Position: -296
Score: 5.8
Sequence: AATTTTCAGAAAATT
Locus tag: SSU05_1888
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: SSU05_1887
Name: ilvN
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: SSU05_1886
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: SSU05_1885
Name: ilvA
Funciton: Threonine dehydratase (EC 4.3.1.19)
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvN
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
ilvA
Threonine dehydratase (EC 4.3.1.19)

Position: -52
Score: 5
Sequence: AATAGTCAGAATATT
Locus tag: SSU05_0801
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: SSU05_0803
Name: thrB
Funciton: Homoserine kinase (EC 2.7.1.39)
hom
Homoserine dehydrogenase (EC 1.1.1.3)
thrB
Homoserine kinase (EC 2.7.1.39)

Position: -146
Score: 5.1
Sequence: AATTTTCAGAATATA
Locus tag: SSU05_0811
Name: scpC
Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
Locus tag: SSU05_0812
Name: scpC
Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
scpC
Serine endopeptidase ScpC (EC 3.4.21.-)
scpC
Serine endopeptidase ScpC (EC 3.4.21.-)

Position: -123
Score: 4.6
Sequence: GTTTTTCTGAAATTT
Locus tag: SSU05_1811
Name: thrA
Funciton: Aspartokinase (EC 2.7.2.4)
thrA
Aspartokinase (EC 2.7.2.4)

Position: -117
Score: 4.9
Sequence: AATTTTCTGTAATTT
Position: -73
Score: 5.3
Sequence: TATTTTCAGAAAATT
Locus tag: SSU05_1547
Name: livH
Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1546
Name: livM
Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SSU05_1545
Name: livG
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1544
Name: livG
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1543
Name: livF
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
livH
Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
livM
Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
livG
Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
livG
Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
livF
Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)

Position: -64
Score: 5.6
Sequence: AATTTTCAGATAATT
Locus tag: SSU05_1548
Name: livK
Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
livK
Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)

Position: -124
Score: 5.3
Sequence: AATTATCAGAATATT
Locus tag: SSU05_0467
Name: asnA
Funciton: Aspartate--ammonia ligase (EC 6.3.1.1)
asnA
Aspartate--ammonia ligase (EC 6.3.1.1)

Position: -63
Score: 4.6
Sequence: AAAAATCAGAAAATA
Locus tag: SSU05_0596
Name: aroA
Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0597
Name: aroA
Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0598
Name: aroA
Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0599
Name: aroK
Funciton: Shikimate kinase I (EC 2.7.1.71)
Locus tag: SSU05_0600
Name: pheA
Funciton: Prephenate dehydratase (EC 4.2.1.51)
Locus tag: SSU05_0601
Name: pheA
Funciton: Prephenate dehydratase (EC 4.2.1.51)
aroA
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
aroA
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
aroA
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
aroK
Shikimate kinase I (EC 2.7.1.71)
pheA
Prephenate dehydratase (EC 4.2.1.51)
pheA
Prephenate dehydratase (EC 4.2.1.51)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD