Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CodY in Streptococcus gordonii str. Challis substr. CH1

Properties
Regulator type: Transcription factor
TF locus tag: SGO_0431
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Streptococcaceae
Statistics of regulated genes:
- Genes 42
- Operons 21
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 273 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -71
Score: 5.6
Sequence: AATTTTCAGATAATT
Locus tag: SGO_0431
Name: codY
Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SGO_0432
Name: pncA
Funciton: Nicotinamidase (EC 3.5.1.19)
codY
Nutrient limitation global transcriptional regulator CodY, CodY family
pncA
Nicotinamidase (EC 3.5.1.19)

Position: -95
Score: 5.8
Sequence: AATTTTCAGAAAATT
Locus tag: SGO_0276
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Position: -99
Score: 5.8
Sequence: AATTTTCTGAAAATT
Locus tag: SGO_1238
Name: ilvE
Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
ilvE
Branched-chain amino acid aminotransferase (EC 2.6.1.42)

Position: -90
Score: 5.2
Sequence: AATATTCTGACAATT
Locus tag: SGO_1712
Name: oppA2
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: SGO_1711
Name: oppB2
Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: SGO_1710
Name: oppC2
Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: SGO_1709
Name: oppD2
Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: SGO_1708
Name: oppF2
Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
oppA2
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
oppB2
Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
oppC2
Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
oppD2
Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
oppF2
Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)

Position: -102
Score: 4.8
Sequence: TATTTTCCGAAAATT
Position: -42
Score: 5.6
Sequence: AATTATCTGAAAATT
Locus tag: SGO_1506
Name: SMU.1109
Funciton: Predicted Mn2+/Fe2+ transporter, NRAMP family
SMU.1109
Predicted Mn2+/Fe2+ transporter, NRAMP family

Position: -60
Score: 5.2
Sequence: AAATGTCAGAAAATT
Locus tag: SGO_0226
Name: ubiE
Funciton: SAM-dependent methyltransferase
ubiE
SAM-dependent methyltransferase

Position: -57
Score: 5.2
Sequence: AATTTTCTGATAAAT
Locus tag: SGO_0139
Name: thrC
Funciton: Threonine synthase (EC 4.2.3.1)
thrC
Threonine synthase (EC 4.2.3.1)

Position: -282
Score: 5.4
Sequence: AATTGTCTGAAAATT
Locus tag: SGO_0565
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)

Position: -249
Score: 5.8
Sequence: AATTTTCTGAAAATT
Position: -27
Score: 5.1
Sequence: AATTTTTTGACAATT
Locus tag: SGO_0526
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: SGO_0527
Name: ilvN
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: SGO_0528
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: SGO_0529
Name: ilvA
Funciton: Threonine dehydratase (EC 4.3.1.19)
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvN
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
ilvA
Threonine dehydratase (EC 4.3.1.19)

Position: -222
Score: 5.4
Sequence: ATTTTTCTGAAAATT
Locus tag: SGO_1927
Name: rpoB
Funciton: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Locus tag: SGO_1926
Name: rpoC
Funciton: DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
rpoB
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
rpoC
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)

Position: -95
Score: 5.3
Sequence: AAAATTCTGAAAATT
Locus tag: SGO_2064
Name: ilvD
Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
ilvD
Dihydroxy-acid dehydratase (EC 4.2.1.9)

Position: -29
Score: 5.5
Sequence: AATTTTTAGAAAATT
Locus tag: SGO_1206
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SGO_1205
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
asd
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
dapA
Dihydrodipicolinate synthase (EC 4.2.1.52)

Position: -173
Score: 4.8
Sequence: AATTTTTAGAAACTT
Locus tag: SGO_1625
Name: acuB
Funciton: Acetoin utilization protein AcuB
acuB
Acetoin utilization protein AcuB

Position: 22
Score: 4.5
Sequence: AATTTCCAGAAAATG
Locus tag: SGO_0342
Name: pepF
Funciton: Oligoendopeptidase F
pepF
Oligoendopeptidase F

Position: -87
Score: 5.1
Sequence: TATATTCAGAAAATT
Locus tag: SGO_0911
Name: yfjA
Funciton: Conserved hypothetical protein
yfjA
Conserved hypothetical protein

Position: -83
Score: 5.2
Sequence: AATTATCTGACAATT
Locus tag: SGO_1165
Name: efeO
Funciton: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Locus tag: SGO_1164
Name: efeB
Funciton: Ferrous iron transport peroxidase EfeB
Locus tag: SGO_1163
Name: efeU
Funciton: Ferrous iron transport permease EfeU
Locus tag: SGO_1162
Name: tatC
Funciton: Twin-arginine translocation protein TatC
Locus tag: SGO_1161
Name: tatA
Funciton: Twin-arginine translocation protein TatA
efeO
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
efeB
Ferrous iron transport peroxidase EfeB
efeU
Ferrous iron transport permease EfeU
tatC
Twin-arginine translocation protein TatC
tatA
Twin-arginine translocation protein TatA

Position: -55
Score: 5.4
Sequence: AATTTTCAGACAATT
Locus tag: SGO_0566
Name: scpC
Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
scpC
Serine endopeptidase ScpC (EC 3.4.21.-)

Position: -42
Score: 5.3
Sequence: AAAATTCAGAAAATT
Locus tag: SGO_0476
Name: ymdE
Funciton: Conserved hypothetical protein
ymdE
Conserved hypothetical protein

Position: -248
Score: 4.8
Sequence: TATTTTCAGAATAAT
Locus tag: SGO_0985
Name: str1582
Funciton: Predicted amino acid ABC transporter, permease protein 1
Locus tag: SGO_0984
Name: str1581
Funciton: Predicted amino acid ABC transporter, permease protein 2
Locus tag: SGO_0983
Name: str1580
Funciton: Predicted amino acid ABC transporter, ATP-binding protein
Locus tag: SGO_0982
Name: str1579
Funciton: Predicted amino acid ABC transporter, substrate-binding protein
str1582
Predicted amino acid ABC transporter, permease protein 1
str1581
Predicted amino acid ABC transporter, permease protein 2
str1580
Predicted amino acid ABC transporter, ATP-binding protein
str1579
Predicted amino acid ABC transporter, substrate-binding protein

Position: -66
Score: 5.6
Sequence: AATTTTCTGATAATT
Locus tag: SGO_1630
Name: livK
Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Locus tag: SGO_1629
Name: livH
Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SGO_1628
Name: livM
Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SGO_1627
Name: livG
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SGO_1626
Name: livF
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
livK
Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
livH
Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
livM
Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
livG
Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
livF
Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)

Position: -38
Score: 4.5
Sequence: AATTGTTTGAATAAT
Locus tag: SGO_1701
Name: thrA
Funciton: Aspartokinase (EC 2.7.2.4)
thrA
Aspartokinase (EC 2.7.2.4)
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