Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CodY in Streptococcus agalactiae 2603V/R

Properties
Regulator type: Transcription factor
TF locus tag: SAG1675
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Streptococcaceae
Statistics of regulated genes:
- Genes 39
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 273 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -115
Score: 5.6
Sequence: AATTTTCTGAATATT
Locus tag: SAG2046
Name: gldA2
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
gldA2
Glycerol dehydrogenase (EC 1.1.1.6)

Position: -93
Score: 5.6
Sequence: AATTATCTGAAAATT
Locus tag: SAG0148
Name: oppA1
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: SAG0149
Name: oppB1
Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: SAG0150
Name: oppC1
Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: SAG0151
Name: oppD1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: SAG0152
Name: oppF1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
oppA1
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
oppB1
Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
oppC1
Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
oppD1
Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
oppF1
Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)

Position: -83
Score: 4.7
Sequence: ATTTATCTGAATTTT
Locus tag: SAG1152
Name: ilvE
Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
ilvE
Branched-chain amino acid aminotransferase (EC 2.6.1.42)

Position: -100
Score: 5.2
Sequence: AATTTTCTGAAAATC
Locus tag: SAG0054
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Locus tag: SAG0055
Name: thrC
Funciton: Threonine synthase (EC 4.2.3.1)
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)
thrC
Threonine synthase (EC 4.2.3.1)

Position: -72
Score: 4.6
Sequence: ATATGTCAGATAATT
Locus tag: SAG0823
Name: gapN
Funciton: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
gapN
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)

Position: -55
Score: 4.9
Sequence: AAAATTCTGACAATT
Locus tag: SAG1335
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Position: -46
Score: 5
Sequence: AATTTTGAGAATATT
Locus tag: SAG1676
Name: alaT
Funciton: Aspartate aminotransferase (EC 2.6.1.1)
Locus tag: SAG1675
Name: codY
Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SAG1674
Name: pncA
Funciton: Nicotinamidase (EC 3.5.1.19)
alaT
Aspartate aminotransferase (EC 2.6.1.1)
codY
Nutrient limitation global transcriptional regulator CodY, CodY family
pncA
Nicotinamidase (EC 3.5.1.19)

Position: -177
Score: 4.7
Sequence: AATATTCTGCTAATT
Locus tag: SAG1010
Name: fatD
Funciton: Iron-siderophore ABC transporter, permease protein 1
Locus tag: SAG1009
Name: fatC
Funciton: Iron-siderophore ABC transporter, permease protein 2
Locus tag: SAG1008
Name: fatA
Funciton: Iron-siderophore ABC transporter, ATP-binding protein
Locus tag: SAG1007
Name: fatB
Funciton: Iron-siderophore ABC transporter, substrate-binding protein
fatD
Iron-siderophore ABC transporter, permease protein 1
fatC
Iron-siderophore ABC transporter, permease protein 2
fatA
Iron-siderophore ABC transporter, ATP-binding protein
fatB
Iron-siderophore ABC transporter, substrate-binding protein

Position: -48
Score: 4.8
Sequence: AATATTCAGAATGTT
Locus tag: SAG0297
Name: pepC
Funciton: Aminopeptidase C (EC 3.4.22.40)
pepC
Aminopeptidase C (EC 3.4.22.40)

Position: -85
Score: 5.3
Sequence: AAAATTCAGAAAATT
Locus tag: SAG2053
Name: scpC
Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
scpC
Serine endopeptidase ScpC (EC 3.4.21.-)

Position: -96
Score: 4.6
Sequence: AATATTCTGAATTTA
Locus tag: SAG0718
Name: gluQ
Funciton: Glutamate ABC transporter, ATP-binding protein
Locus tag: SAG0717
Name: gluH
Funciton: Glutamate ABC transporter, substrate-binding protein
Locus tag: SAG0716
Name: gluM
Funciton: Glutamate ABC transporter, permease protein 1
Locus tag: SAG0715
Name: gluP
Funciton: Glutamate ABC transporter, permease protein 2
gluQ
Glutamate ABC transporter, ATP-binding protein
gluH
Glutamate ABC transporter, substrate-binding protein
gluM
Glutamate ABC transporter, permease protein 1
gluP
Glutamate ABC transporter, permease protein 2

Position: -127
Score: 5.1
Sequence: AATTTTCAGATTTTT
Locus tag: SAG0758
Name: pepF
Funciton: Oligoendopeptidase F
pepF
Oligoendopeptidase F

Position: -96
Score: 5.1
Sequence: AAAAATCTGAAAATT
Locus tag: SAG0759
Name: ppc
Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
ppc
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)

Position: -232
Score: 5
Sequence: AATCTTCAGATAATT
Locus tag: SAG1444
Name: dtpT
Funciton: Di- and tripeptide permease DtpT
dtpT
Di- and tripeptide permease DtpT

Position: -52
Score: 4.9
Sequence: AATTTTCTGACTTTT
Locus tag: SAG0339
Name: thrA
Funciton: Aspartokinase (EC 2.7.2.4)
thrA
Aspartokinase (EC 2.7.2.4)

Position: -128
Score: 5.2
Sequence: AACTTTCTGAAAATT
Locus tag: SAG0160
Name: rpoB
Funciton: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Locus tag: SAG0161
Name: rpoC
Funciton: DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
rpoB
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
rpoC
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)

Position: -85
Score: 4.6
Sequence: AAAATTCAAAAAAAT
Locus tag: SAG0894
Name: cas9
Funciton: CRISPR/Cas system-associated protein Cas9
Locus tag: SAG0895
Name: cas1
Funciton: CRISPR/Cas system-associated protein Cas1
Locus tag: SAG0896
Name: cas2
Funciton: CRISPR/Cas system-associated protein Cas2
Locus tag: SAG0897
Name: csn2
Funciton: CRISPR/Cas system-associated protein Csn2
cas9
CRISPR/Cas system-associated protein Cas9
cas1
CRISPR/Cas system-associated protein Cas1
cas2
CRISPR/Cas system-associated protein Cas2
csn2
CRISPR/Cas system-associated protein Csn2

Position: -56
Score: 5.3
Sequence: AATATTCTGATAATT
Locus tag: SAG1582
Name: livK
Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Locus tag: SAG1581
Name: livH
Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SAG1580
Name: livM
Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SAG1579
Name: livG
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SAG1578
Name: livF
Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
livK
Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
livH
Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
livM
Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
livG
Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
livF
Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD