Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CodY in Lactococcus lactis subsp. lactis Il1403

Properties
Regulator type: Transcription factor
TF locus tag: L0243
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Streptococcaceae
Statistics of regulated genes:
- Genes 30
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 273 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -123
Score: 5.2
Sequence: AATTATCAGAAAAAT
Position: -55
Score: 5.2
Sequence: AATTTTCAGAATAAT
Locus tag: L143312
Name: oppA1
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
oppA1
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)

Position: -80
Score: 4.7
Sequence: AATTGTCAGAATATA
Locus tag: L0119
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: L114827
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)

Position: -62
Score: 5
Sequence: AATTGTCAGAAAATA
Locus tag: L0236
Name: nrgA
Funciton: Ammonium transporter
Locus tag: L0235
Name: nrgB
Funciton: Nitrogen regulatory protein P-II
nrgA
Ammonium transporter
nrgB
Nitrogen regulatory protein P-II

Position: -86
Score: 4.9
Sequence: AATATTCTGACAAAT
Locus tag: L0077
Name: ilvD
Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Locus tag: L0078
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: L0079
Name: ilvN
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: L0080
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: L0081
Name: ilvA
Funciton: Threonine dehydratase (EC 4.3.1.19)
ilvD
Dihydroxy-acid dehydratase (EC 4.2.1.9)
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvN
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
ilvA
Threonine dehydratase (EC 4.3.1.19)

Position: -129
Score: 4.7
Sequence: AATTTTCAGAAAACA
Position: -61
Score: 5
Sequence: AATTTTCTGACAATA
Locus tag: L145267
Name: oppA1
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: L147009
Name: oppB1
Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: L147936
Name: oppC1
Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: L148976
Name: oppD1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: L150031
Name: oppF1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
oppA1
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
oppB1
Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
oppC1
Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
oppD1
Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
oppF1
Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)

Position: -101
Score: 5.4
Sequence: AATTTTCTGACAATT
Locus tag: L0243
Name: codY
Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
codY
Nutrient limitation global transcriptional regulator CodY, CodY family

Position: -299
Score: 4.7
Sequence: ATAATTCAGATAATT
Locus tag: L0065
Name: hisC
Funciton: Histidinol-phosphate aminotransferase (EC 2.6.1.9)
Locus tag: L0341
Name: hisZ
Funciton: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
Locus tag: L0066
Name: hisG
Funciton: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)
Locus tag: L0067
Name: hisD
Funciton: Histidinol dehydrogenase (EC 1.1.1.23)
hisC
Histidinol-phosphate aminotransferase (EC 2.6.1.9)
hisZ
ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
hisG
ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)
hisD
Histidinol dehydrogenase (EC 1.1.1.23)

Position: -190
Score: 4.8
Sequence: AATTGTCACAAAATT
Locus tag: L0093
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
dapA
Dihydrodipicolinate synthase (EC 4.2.1.52)

Position: -125
Score: 4.8
Sequence: ATTTTTTTGATAATT
Locus tag: L130687
Name: pepC
Funciton: Aminopeptidase C (EC 3.4.22.40)
pepC
Aminopeptidase C (EC 3.4.22.40)

Position: -41
Score: 4.9
Sequence: AATTATCTTAAAATT
Locus tag: L0090
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: L0091
Name: thrB
Funciton: Homoserine kinase (EC 2.7.1.39)
hom
Homoserine dehydrogenase (EC 1.1.1.3)
thrB
Homoserine kinase (EC 2.7.1.39)

Position: -70
Score: 5.6
Sequence: AATTATCTGAAAATT
Locus tag: L0097
Name: thrA
Funciton: Aspartokinase (EC 2.7.2.4)
thrA
Aspartokinase (EC 2.7.2.4)

Position: -59
Score: 5.6
Sequence: AATTATCAGAAAATT
Locus tag: L0083
Name: serC
Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
Locus tag: L0084
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: L0085
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
serC
Phosphoserine aminotransferase (EC 2.6.1.52)
serA
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
serB
Phosphoserine phosphatase (EC 3.1.3.3)

Position: -226
Score: 4.9
Sequence: AATTTTCCGAAAAAT
Locus tag: L0101
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: L0102
Name: metB1
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
metB1
Cystathionine gamma-synthase (EC 2.5.1.48)
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