Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Shewanella baltica OS155

Properties
Regulator type: Transcription factor
TF locus tag: Sbal_0792
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Statistics of regulated genes:
- Genes 31
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 249 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -134
Score: 4.8
Sequence: TACCTGTTTAGGGGTA
Locus tag: Sbal_0284
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: Sbal_0285
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: Sbal_0286
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: Sbal_0287
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
Locus tag: Sbal_0288
Name: modA
Funciton: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Locus tag: Sbal_0289
Name: modB
Funciton: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
Locus tag: Sbal_0290
Name: modC
Funciton: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
moaA
Molybdenum cofactor biosynthesis protein MoaA
moaC
Molybdenum cofactor biosynthesis protein MoaC
moaD
Molybdenum cofactor biosynthesis protein MoaD
moaE
Molybdenum cofactor biosynthesis protein MoaE
modA
Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
modB
Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
modC
Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)

Position: -146
Score: 5.1
Sequence: TACCTCTTAGGGGGTA
Locus tag: Sbal_0793
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Locus tag: Sbal_0792
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
narP
Nitrate/nitrite response regulator protein NarP, LuxR family

Position: -72
Score: 4.8
Sequence: TACCTCCAAATTGGTA
Locus tag: Sbal_1321
Name: adhB
Funciton: Alcohol dehydrogenase, iron-containing (EC 1.1.1.1)
adhB
Alcohol dehydrogenase, iron-containing (EC 1.1.1.1)

Position: -132
Score: 4.5
Sequence: TACCTATAAGTGAGTA
Locus tag: Sbal_1490
Name: ompW
Funciton: Outer membrane protein W precursor
ompW
Outer membrane protein W precursor

Position: -119
Score: 4.9
Sequence: TACCTCTTGTGAGGTA
Locus tag: Sbal_3510
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sbal_3511
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sbal_3512
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napB
Nitrate reductase cytochrome c550-type subunit

Position: -95
Score: 5.2
Sequence: TACCCCCTAAGAGGTA
Locus tag: Sbal_0794
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
nrfA
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)

Position: -42
Score: 4.7
Sequence: TAACCCTTATTAAGTA
Locus tag: Sbal_0859
Name: fccA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
fccA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)

Position: -180
Score: 4.8
Sequence: TACTCCTAAAGAAATA
Locus tag: Sbal_1590
Name: omcA
Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
omcA
Surface localized decaheme cytochrome c lipoprotein, OmcA

Position: -78
Score: 4.7
Sequence: TACCACTTTGTAAGTA
Locus tag: Sbal_1478
Name: mtrF
Funciton: Decaheme cytochrome c MtrF
mtrF
Decaheme cytochrome c MtrF

Position: -144
Score: 4.6
Sequence: TACCAATTTGGAGGTA
Locus tag: Sbal_1908
Name: napE2
Funciton: Periplasmic nitrate reductase component NapE
Locus tag: Sbal_1909
Name: napD2
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sbal_1910
Name: napA2
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sbal_1911
Name: napB2
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Sbal_1912
Name: napC2
Funciton: Cytochrome c-type protein NapC
napE2
Periplasmic nitrate reductase component NapE
napD2
Periplasmic nitrate reductase component NapD
napA2
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napB2
Nitrate reductase cytochrome c550-type subunit
napC2
Cytochrome c-type protein NapC

Position: -217
Score: 4.4
Sequence: TACCTCCAAAGTATTA
Locus tag: Sbal_2843
Name: SO3141
Funciton: Nonaheme cytochrome c lipoprotein
SO3141
Nonaheme cytochrome c lipoprotein

Position: -82
Score: 4.2
Sequence: TACTCATATCGAGATA
Locus tag: Sbal_1680
Name: nnrS
Funciton: Heme-copper-containing inner membrane protein
nnrS
Heme-copper-containing inner membrane protein

Position: -217
Score: 3.7
Sequence: TAACTCGACAGAGTTA
Locus tag: Sbal_0578
Name: crp
Funciton: Cyclic AMP receptor protein, transcriptional regulator Crp
crp
Cyclic AMP receptor protein, transcriptional regulator Crp

Position: -136
Score: 5
Sequence: TACTCCTTAAGAGATA
Locus tag: Sbal_3989
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN
dnrN
Nitric oxide-dependent regulator DnrN

Position: -204
Score: 5.2
Sequence: TACCTCTTTAGAAATA
Locus tag: Sbal_1589
Name: mtrC
Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sbal_1588
Name: mtrA
Funciton: Periplasmic decaheme cytochrome c, MtrA
Locus tag: Sbal_1587
Name: mtrB
Funciton: Outer membrane protein, MtrB
mtrC
Surface localized decaheme cytochrome c lipoprotein, MtrC
mtrA
Periplasmic decaheme cytochrome c, MtrA
mtrB
Outer membrane protein, MtrB

Position: -256
Score: 4.9
Sequence: TACCACTTAAGTAGTA
Locus tag: Sbal_3570
Name: omp35
Funciton: Outer membrane porin, predicted
omp35
Outer membrane porin, predicted
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