Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Shewanella putrefaciens CN-32

Properties
Regulator type: Transcription factor
TF locus tag: Sputcn32_0683
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Statistics of regulated genes:
- Genes 35
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 249 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -145
Score: 4.4
Sequence: TACCGATTTGGAGGTA
Locus tag: Sputcn32_1901
Name: napE2
Funciton: Periplasmic nitrate reductase component NapE
Locus tag: Sputcn32_1902
Name: napD2
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sputcn32_1903
Name: napA2
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputcn32_1904
Name: napB2
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Sputcn32_1905
Name: napC2
Funciton: Cytochrome c-type protein NapC
napE2
Periplasmic nitrate reductase component NapE
napD2
Periplasmic nitrate reductase component NapD
napA2
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napB2
Nitrate reductase cytochrome c550-type subunit
napC2
Cytochrome c-type protein NapC

Position: -219
Score: 4.9
Sequence: TACCTCTAAAGTAATA
Locus tag: Sputcn32_2507
Name: SO3141
Funciton: Nonaheme cytochrome c lipoprotein
SO3141
Nonaheme cytochrome c lipoprotein

Position: -162
Score: 5.2
Sequence: TACCTCTTAGGAGGTA
Locus tag: Sputcn32_0684
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Locus tag: Sputcn32_0683
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
narP
Nitrate/nitrite response regulator protein NarP, LuxR family

Position: -242
Score: 4.1
Sequence: TAACCCTTACTAGGTG
Position: -132
Score: 4.6
Sequence: TACCTATAAGTGGGTA
Locus tag: Sputcn32_1392
Name: ompW
Funciton: Outer membrane protein W precursor
ompW
Outer membrane protein W precursor

Position: -77
Score: 4.5
Sequence: TACCTCTTTTTAGGTG
Locus tag: Sputcn32_2432
Name: SO3058
Funciton: Flavocytochrome c, flavin subunit
Locus tag: Sputcn32_2431
Name: SO3057
Funciton: Phenylalanine/histidine ammonia-lyase family protein
Locus tag: Sputcn32_2430
Name: SO3056
Funciton: Flavocytochrome c, heme submit
SO3058
Flavocytochrome c, flavin subunit
SO3057
Phenylalanine/histidine ammonia-lyase family protein
SO3056
Flavocytochrome c, heme submit

Position: -256
Score: 5.1
Sequence: TACCTCTTAAGTAGTA
Locus tag: Sputcn32_0781
Name: omp35
Funciton: Outer membrane porin, predicted
omp35
Outer membrane porin, predicted

Position: -42
Score: 4.7
Sequence: TAACCCTTATTAAGTA
Locus tag: Sputcn32_0905
Name: fccA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
fccA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)

Position: -116
Score: 4.9
Sequence: TACCTCTTGTGAGGTA
Locus tag: Sputcn32_3147
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sputcn32_3148
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputcn32_3149
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: Sputcn32_3150
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: Sputcn32_3151
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit

Position: -180
Score: 5.1
Sequence: TACCCCTAAAGAAATA
Locus tag: Sputcn32_1479
Name: omcA
Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
omcA
Surface localized decaheme cytochrome c lipoprotein, OmcA

Position: -104
Score: 4.2
Sequence: CACCTAAAAAGAGGTA
Locus tag: Sputcn32_2433
Name: SO3059
Funciton: Predicted transcriptional activator
SO3059
Predicted transcriptional activator

Position: -77
Score: 4.9
Sequence: TACCACTTTATAAGTA
Locus tag: Sputcn32_1380
Name: mtrF
Funciton: Decaheme cytochrome c MtrF
mtrF
Decaheme cytochrome c MtrF

Position: -134
Score: 4.8
Sequence: TACCTGTTTAGGGGTA
Locus tag: Sputcn32_0389
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: Sputcn32_0390
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: Sputcn32_0391
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: Sputcn32_0392
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
Locus tag: Sputcn32_0393
Name: modA
Funciton: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Locus tag: Sputcn32_0394
Name: modB
Funciton: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
Locus tag: Sputcn32_0395
Name: modC
Funciton: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
moaA
Molybdenum cofactor biosynthesis protein MoaA
moaC
Molybdenum cofactor biosynthesis protein MoaC
moaD
Molybdenum cofactor biosynthesis protein MoaD
moaE
Molybdenum cofactor biosynthesis protein MoaE
modA
Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
modB
Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
modC
Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)

Position: -217
Score: 3.7
Sequence: TAACTCGACAGAGTTA
Locus tag: Sputcn32_0652
Name: crp
Funciton: Cyclic AMP receptor protein, transcriptional regulator Crp
crp
Cyclic AMP receptor protein, transcriptional regulator Crp

Position: -95
Score: 5.2
Sequence: TACCTCCTAAGAGGTA
Locus tag: Sputcn32_0685
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
nrfA
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)

Position: -137
Score: 4.6
Sequence: TACTCCCTAAGGAATA
Locus tag: Sputcn32_3576
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN
dnrN
Nitric oxide-dependent regulator DnrN

Position: -204
Score: 5.2
Sequence: TACCTCTTTAGAAATA
Locus tag: Sputcn32_1478
Name: mtrC
Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sputcn32_1477
Name: mtrA
Funciton: Periplasmic decaheme cytochrome c, MtrA
Locus tag: Sputcn32_1476
Name: mtrB
Funciton: Outer membrane protein, MtrB
mtrC
Surface localized decaheme cytochrome c lipoprotein, MtrC
mtrA
Periplasmic decaheme cytochrome c, MtrA
mtrB
Outer membrane protein, MtrB
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