Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Haemophilus somnus 2336

Properties
Regulator type: Transcription factor
TF locus tag: HSM_1935
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Pasteurellales
Statistics of regulated genes:
- Genes 24
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -51
Score: 4
Sequence: TACCACTAAATGATTA
Locus tag: HSM_0381
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -108
Score: 4
Sequence: TAACAAAAAAGAGTTA
Locus tag: HSM_0782
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: HSM_0781
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: HSM_0780
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: HSM_0779
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)

Position: -96
Score: 3.8
Sequence: TACAACTAAAGAGTTA
Locus tag: HSM_0718
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HSM_0719
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HSM_0720
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HSM_0721
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HSM_0722
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HSM_0723
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HSM_0724
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HSM_0725
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HSM_0726
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -219
Score: 3.7
Sequence: TTACTTTTAGTAGTAA
Position: -197
Score: 4.5
Sequence: TACCGTTTTTGGGTTA
Locus tag: HSM_0129
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: HSM_0130
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Position: -139
Score: 4.5
Sequence: TACTCATTTTTGGTTA
Locus tag: HSM_0492
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: HSM_0493
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: HSM_0494
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: HSM_0495
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: HSM_0496
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: HSM_0497
Name: napC
Funciton: Cytochrome c-type protein NapC
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -35
Score: 3.9
Sequence: TACTTATTTTAGATTA
Locus tag: HSM_1613
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -193
Score: 4.3
Sequence: TAATCATTAAGAGGTA
Locus tag: HSM_1119
Name: lctP
Funciton: L-lactate permease
lctP
L-lactate permease
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD