Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Actinobacillus succinogenes 130Z

Properties
Regulator type: Transcription factor
TF locus tag: Asuc_0362
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Pasteurellales
Statistics of regulated genes:
- Genes 47
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -121
Score: 3.7
Sequence: TAGTTAAAAAGAGGTA
Locus tag: Asuc_1813
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: Asuc_1814
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: Asuc_1815
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: Asuc_1816
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)

Position: -39
Score: 3.7
Sequence: TACCCAGTTCAAGTTA
Locus tag: Asuc_1612
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
mdh
Malate dehydrogenase (EC 1.1.1.37)

Position: -78
Score: 4.5
Sequence: TAACATTTTTTAGGTA
Locus tag: Asuc_0221
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -152
Score: 4.3
Sequence: TACCTCATAATAAGTA
Locus tag: Asuc_0352
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: Asuc_0351
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
hcp
Hydroxylamine reductase (EC 1.7.-.-)
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)

Position: -93
Score: 4.8
Sequence: TACCTCTAAATGGTTA
Locus tag: Asuc_0843
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: Asuc_0844
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: Asuc_0845
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: Asuc_0846
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: Asuc_0847
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: Asuc_0848
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: Asuc_0849
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: Asuc_0850
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: Asuc_0851
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -139
Score: 4.3
Sequence: TACCTATTTTTGAGTG
Locus tag: Asuc_1602
Name: norB
Funciton: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
norB
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent

Position: -69
Score: 4.5
Sequence: TACCTCTAAAGAAGTA
Locus tag: Asuc_0591
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -146
Score: 3.7
Sequence: TTCTCATTTATAATTA
Locus tag: Asuc_1277
Name: hybO
Funciton: Hydrogenase II, small subunit (EC 1.12.99.6)
Locus tag: Asuc_1278
Name: hybA
Funciton: Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
Locus tag: Asuc_1279
Name: hybB
Funciton: Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
Locus tag: Asuc_1280
Name: hybC
Funciton: Hydrogenase II, large subunit (EC 1.12.99.6)
Locus tag: Asuc_1281
Name: hybD
Funciton: Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
Locus tag: Asuc_1282
Name: hybE
Funciton: Hydrogenase II, maturation chaperone (EC 1.12.99.6)
Locus tag: Asuc_1283
Name: hybG
Funciton: Hydrogenase II, accessory protein (EC 1.12.99.6)
hybO
Hydrogenase II, small subunit (EC 1.12.99.6)
hybA
Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
hybB
Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
hybC
Hydrogenase II, large subunit (EC 1.12.99.6)
hybD
Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
hybE
Hydrogenase II, maturation chaperone (EC 1.12.99.6)
hybG
Hydrogenase II, accessory protein (EC 1.12.99.6)

Position: -47
Score: 4.4
Sequence: TACCCCTATTGGGGTG
Locus tag: Asuc_1915
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: Asuc_1914
Name: torZ
Funciton: Biotin sulfoxide reductase
torY
Biotin sulfoxide reductase, cytochrome c-type
torZ
Biotin sulfoxide reductase

Position: -42
Score: 4.2
Sequence: TACCCCATATTAGGGA
Locus tag: Asuc_0879
Name: arcA
Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family
arcA
Anaerobic metabolism transcriptional regulator arcA, OmpR family

Position: -76
Score: 4.2
Sequence: TACCCCATGATAGGTA
Locus tag: Asuc_2040
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: Asuc_2039
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Asuc_2038
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Asuc_2037
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: Asuc_2036
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: Asuc_2035
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Asuc_2034
Name: napC
Funciton: Cytochrome c-type protein NapC
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -377
Score: 4.7
Sequence: TAACTTATTATAGTTA
Position: -321
Score: 4.6
Sequence: TACCTATTGTTAGGTA
Locus tag: Asuc_0704
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: Asuc_0705
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: Asuc_0706
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: Asuc_0707
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: Asuc_0708
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: Asuc_0709
Name: nrfX
Funciton: Nitrite reductase, predicted component NrfX
Locus tag: Asuc_0710
Name: nrfF
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
Locus tag: Asuc_0711
Name: nrfG
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
Locus tag: Asuc_0712
Name: yhiN
Funciton: Predicted oxydoreductase
nrfA
Nitrite reductase, cytochrome c(552)
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
Nitrite reductase, Fe-S center subunit
nrfD
Nitrite reductase, NrfD component
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
nrfX
Nitrite reductase, predicted component NrfX
nrfF
Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
nrfG
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
yhiN
Predicted oxydoreductase

Position: -52
Score: 4.2
Sequence: TACTATATTTGAGTTA
Position: -34
Score: 3.9
Sequence: TACCCATTTTAGATTA
Locus tag: Asuc_2051
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -134
Score: 4.3
Sequence: TACCTAGATAGAGTGA
Locus tag: Asuc_1970
Name: lctP
Funciton: L-lactate permease
lctP
L-lactate permease
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