Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Mannheimia succiniciproducens MBEL55E

Properties
Regulator type: Transcription factor
TF locus tag: MS0278
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Pasteurellales
Statistics of regulated genes:
- Genes 48
- Operons 17
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -155
Score: 4.4
Sequence: TCACTTTTTTGAGGTA
Locus tag: MS1652
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: MS1653
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: MS1654
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: MS1655
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)

Position: -154
Score: 5
Sequence: TAACTATTTTTAGTTA
Position: -42
Score: 3.9
Sequence: TACCAATTTCAAGTTA
Locus tag: MS1266
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
mdh
Malate dehydrogenase (EC 1.1.1.37)

Position: -80
Score: 4.5
Sequence: TAACATTTTTTAGGTA
Locus tag: MS2293
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -51
Score: 4.6
Sequence: TAACTATAAGTAGTTA
Locus tag: MS0587
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: MS0588
Name: torZ
Funciton: Biotin sulfoxide reductase
torY
Biotin sulfoxide reductase, cytochrome c-type
torZ
Biotin sulfoxide reductase

Position: -133
Score: 4.4
Sequence: TAACTTTATGGGGTGA
Locus tag: MS0715
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: MS0716
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Position: -32
Score: 4.1
Sequence: TAACTAATTTTTATTA
Locus tag: MS1504
Name: arcA
Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family
arcA
Anaerobic metabolism transcriptional regulator arcA, OmpR family

Position: -138
Score: 4.2
Sequence: TACTTATTTTTAAGTG
Locus tag: MS0293
Name: norB
Funciton: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Locus tag: MS0294
Name: norB
Funciton: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
norB
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
norB
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent

Position: -78
Score: 4.1
Sequence: TAACCTATTATTGGTA
Locus tag: MS0740
Name: ompW
Funciton: Outer membrane protein W precursor
ompW
Outer membrane protein W precursor

Position: -103
Score: 4.1
Sequence: CACCTCTAAAGAGGTA
Locus tag: MS0601
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: MS0602
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: MS0603
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: MS0604
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: MS0605
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: MS0606
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: MS0607
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: MS0608
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: MS0609
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -278
Score: 4.1
Sequence: TTCCCTATTTTAGTTA
Position: -159
Score: 4.2
Sequence: TAATTTTATTTGGTTG
Locus tag: MS0309
Name: nqrA
Funciton: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: MS0308
Name: nqrB
Funciton: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: MS0307
Name: nqrC
Funciton: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: MS0306
Name: nqrD
Funciton: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: MS0305
Name: nqrE
Funciton: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: MS0304
Name: nqrF
Funciton: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
nqrA
Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
nqrB
Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
nqrC
Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
nqrD
Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
nqrE
Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
nqrF
Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)

Position: -268
Score: 4.2
Sequence: TAACTAATTTAAGTTA
Position: -254
Score: 4.6
Sequence: TAACTATAAAGAGGTA
Locus tag: MS1819
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: MS1818
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: MS1817
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: MS1816
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: MS1815
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
nrfA
Nitrite reductase, cytochrome c(552)
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
Nitrite reductase, Fe-S center subunit
nrfD
Nitrite reductase, NrfD component
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE

Position: -206
Score: 4.3
Sequence: TTACTCTATTTGGGTA
Locus tag: MS0400
Name: focA
Funciton: Formate transporter, FNT family
Locus tag: MS0401
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA
Formate transporter, FNT family
pflB
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -22
Score: 4.3
Sequence: TAACTCTTTCGGGGAA
Locus tag: MS1877
Name: dcuB
Funciton: C4-dicarboxylate transporter
dcuB
C4-dicarboxylate transporter

Position: -91
Score: 4.4
Sequence: TACCCCTTTCGGGTTG
Locus tag: MS2283
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: MS2282
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: MS2281
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: MS2280
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: MS2279
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: MS2278
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: MS2277
Name: napC
Funciton: Cytochrome c-type protein NapC
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -172
Score: 3.8
Sequence: CACCTCTTTATTATTA
Locus tag: MS0753
Name: lctP
Funciton: L-lactate permease
lctP
L-lactate permease

Position: -34
Score: 3.9
Sequence: TACCCATTTTAGATTA
Locus tag: MS0256
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -156
Score: 4.4
Sequence: TACCTGTTAAGAGGTA
Locus tag: MS0291
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: MS0292
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
hcp
Hydroxylamine reductase (EC 1.7.-.-)
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)
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