Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Haemophilus influenzae Rd KW20

Properties
Regulator type: Transcription factor
TF locus tag: HI0726
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Pasteurellales
Statistics of regulated genes:
- Genes 28
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -151
Score: 4.6
Sequence: TAGCTTTTTTGAGGTA
Locus tag: HI0835
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: HI0834
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: HI0833
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: HI0832
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)

Position: -19
Score: 3.8
Sequence: TAACACATAAGGAGTA
Locus tag: HI1210
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
mdh
Malate dehydrogenase (EC 1.1.1.37)

Position: -105
Score: 4.5
Sequence: TACCTATTAATGATTA
Position: -47
Score: 4.7
Sequence: TAACTCGTTTTAGTTA
Locus tag: HI1047
Name: dmsA
Funciton: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Locus tag: HI1046
Name: dmsB
Funciton: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-)
Locus tag: HI1045
Name: dmsC
Funciton: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-)
Locus tag: HI1044
Name: dmsD
Funciton: Dimethyl sulfoxide reductase chaperone protein dmsD
Locus tag: HI1043
Name: dmsX
Funciton: Predicted ferredoxin
dmsA
Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
dmsB
Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-)
dmsC
Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-)
dmsD
Dimethyl sulfoxide reductase chaperone protein dmsD
dmsX
Predicted ferredoxin

Position: -48
Score: 4.6
Sequence: TAACTATAAGTAGTTA
Locus tag: HI0644
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: HI0643
Name: torZ
Funciton: Biotin sulfoxide reductase
torY
Biotin sulfoxide reductase, cytochrome c-type
torZ
Biotin sulfoxide reductase

Position: -83
Score: 3.7
Sequence: CACTTTTTTATTGTTA
Locus tag: HI0884
Name: arcA
Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family
arcA
Anaerobic metabolism transcriptional regulator arcA, OmpR family

Position: -84
Score: 4.6
Sequence: TACTTCTAAAGAGTTA
Locus tag: HI1089
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HI1090
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HI1091
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HI1092
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HI1093
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HI1094
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HI1095
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HI1096m
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HI1097m
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -99
Score: 4.7
Sequence: TACCTCTTTTTGAGTA
Locus tag: HI1069
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: HI1068
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: HI1067
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: HI1066
Name: nrfD
Funciton: Nitrite reductase, NrfD component
nrfA
Nitrite reductase, cytochrome c(552)
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
Nitrite reductase, Fe-S center subunit
nrfD
Nitrite reductase, NrfD component

Position: -37
Score: 4.2
Sequence: TAACCCGTTTTAATTA
Position: -23
Score: 4.2
Sequence: TAACTTAATTGAGGAA
Locus tag: HI0932
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -126
Score: 3.8
Sequence: TCACTAAAAAGAGGTA
Locus tag: HI0809
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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