Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Vibrionales
Statistics of regulated genes:
- Genes 26
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 135 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -232
Score: 4.8
Sequence: TACCCATTTAGGGCTA
Locus tag: VC1024
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: VC1025
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: VC1026
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: VC1027
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: VC1028
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
moaA
Molybdenum cofactor biosynthesis protein MoaA
moaB
Molybdenum cofactor biosynthesis protein MoaB
moaC
Molybdenum cofactor biosynthesis protein MoaC
moaD
Molybdenum cofactor biosynthesis protein MoaD
moaE
Molybdenum cofactor biosynthesis protein MoaE

Position: -95
Score: 5.1
Sequence: TACCTCTTAGGAGGTA
Position: -21
Score: 4.4
Sequence: TAGCCCTAAAGAGGTG
Locus tag: VCA0675
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)

Position: -192
Score: 4.1
Sequence: TACCACTTGTTAGGTA
Locus tag: VC2033
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -133
Score: 4.7
Sequence: TACCACTTAATGGGTG
Locus tag: VC2656
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: VC2657
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: VC2658
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: VC2659
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
frdD
Fumarate reductase subunit D (EC 1.3.5.4)

Position: -61
Score: 3.9
Sequence: CTACCCTTTAGGGTTA
Locus tag: VC1434
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
fnr
Fumarate and nitrate reduction regulatory protein, Crp family

Position: -152
Score: 4.5
Sequence: CACCTCTTTAGGGCTA
Position: -78
Score: 5.1
Sequence: TACCTCCTAAGAGGTA
Locus tag: VCA0676
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: VCA0677
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: VCA0678
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: VCA0679
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: VCA0680
Name: napC
Funciton: Cytochrome c-type protein NapC
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -46
Score: 5.2
Sequence: TACCCCAAAAGGGGTA
Locus tag: VC1951
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: VC1950
Name: torZ
Funciton: Biotin sulfoxide reductase
torY
Biotin sulfoxide reductase, cytochrome c-type
torZ
Biotin sulfoxide reductase

Position: -144
Score: 4.4
Sequence: TAACTACAAAGGGTTA
Locus tag: VC2057
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VC2056
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VC2055
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VC2054
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VC2053
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VC2052
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VC2051
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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