Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PaaR in Silicibacter pomeroyi DSS-3

Properties
Regulator type: Transcription factor
TF locus tag: SPO0743
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Rhodobacterales
Statistics of regulated genes:
- Genes 7
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -61
Score: 6.4
Sequence: ATTGACCAACCGTTCGGTTTAT
Locus tag: SPO0740
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: SPO0741
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: SPO0742
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: SPO0743
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaF
Enoyl-CoA hydratase (EC 4.2.1.17)
paaY
thioesterase superfamily protein
paaK
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaR
Transcriptional regulator of phenylacetic acid degradation, TetR family

Position: -90
Score: 5.4
Sequence: ATTGACCGACCGTTCGGTCGCG
Locus tag: SPO0735
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: SPO0734
Name: paaX
Funciton: Phenylacetic acid degradation operon negative regulatory protein paaX
paaZ
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaX
Phenylacetic acid degradation operon negative regulatory protein paaX

Position: -63
Score: 6.4
Sequence: ATAAACCGAACGGTTGGTCAAT
Locus tag: SPO0739
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaG
Enoyl-CoA hydratase (EC 4.2.1.17)
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