Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcpA in Streptococcus uberis 0140J

Properties
Regulator type: Transcription factor
TF locus tag: SUB0536
Regulator family: LacI
Regulation mode:
Biological process: Global catabolite repression
Effector: Fructose-1,6-bisphosphate; HPr, phosphocarrier protein
Regulog: CcpA - Streptococcaceae
Statistics of regulated genes:
- Genes 139
- Operons 61
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 968 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -122
Score: 4.5
Sequence: ATGAAAGCGGTTAATA
Locus tag: SUB1529
Name: aspC
Funciton: Aspartate aminotransferase (EC 2.6.1.1)
aspC
Aspartate aminotransferase (EC 2.6.1.1)

Position: -64
Score: 4.7
Sequence: AAGATAGCGTTTTCTT
Locus tag: SUB0338
Name: SPy0278
Funciton: Conserved hypothetical protein
SPy0278
Conserved hypothetical protein

Position: -185
Score: 4.1
Sequence: TAATAAACGATTTAAT
Position: -75
Score: 4.2
Sequence: GTGATAACGTTTTCTT
Locus tag: SUB0135
Name: sacC
Funciton: Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)
sacC
Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)

Position: -109
Score: 4.4
Sequence: TTGTTTGCGCTTTCAT
Locus tag: SUB0619
Name: fbp
Funciton: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)
fbp
Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)

Position: -118
Score: 4.8
Sequence: TTGTAACCGTTTACAA
Locus tag: SUB0041
Name: manR
Funciton: Predicted N-acetylgalactosamine utilization transcriptional regulator ManR, GntR family
manR
Predicted N-acetylgalactosamine utilization transcriptional regulator ManR, GntR family

Position: -126
Score: 4.3
Sequence: AAGAAAACGCAAACAT
Position: -72
Score: 4.1
Sequence: ATGAAAACAGTTGCAT
Locus tag: SUB0907
Name: yieF
Funciton: Predicted NADH-dependent flavin oxidoreductase
Locus tag: SUB0908
Name: frd2
Funciton: Predicted NADPH-dependent FMN reductase
yieF
Predicted NADH-dependent flavin oxidoreductase
frd2
Predicted NADPH-dependent FMN reductase

Position: -95
Score: 4.6
Sequence: CTGAAAGCGCTTGCAA
Locus tag: SUB1370
Name: SUB1370
Funciton: Hypothetical protein / zinc carboxypeptidase
SUB1370
Hypothetical protein / zinc carboxypeptidase

Position: -65
Score: 4.2
Sequence: TTGAAAGCGTATACAC
Locus tag: SUB0529
Name: celB
Funciton: Cellobiose-specific PTS, component EIIB
Locus tag: SUB0530
Name: celR
Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SUB0531
Name: celA
Funciton: Cellobiose-specific PTS, component EIIA
Locus tag: SUB0532
Name: SP_0309
Funciton: Conserved hypothetical protein
Locus tag: SUB0533
Name: celD
Funciton: Cellobiose-specific PTS, component EIIC
celB
Cellobiose-specific PTS, component EIIB
celR
Cellobiose utilization transcriptional regulator CelR, BglG family
celA
Cellobiose-specific PTS, component EIIA
SP_0309
Conserved hypothetical protein
celD
Cellobiose-specific PTS, component EIIC

Position: -74
Score: 4.6
Sequence: TTGACAGCGATTTCAT
Locus tag: SUB1199
Name: SDEG_1360
Funciton: Hydrolase, haloacid dehalogenase-like family
Locus tag: SUB1198
Name: SDEG_1359
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
SDEG_1360
Hydrolase, haloacid dehalogenase-like family
SDEG_1359
Beta-hexosaminidase (EC 3.2.1.52)

Position: -115
Score: 4.5
Sequence: TTGAAACCACTTTCAA
Locus tag: SUB0535
Name: pepQ
Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9)
pepQ
Xaa-Pro dipeptidase (EC 3.4.13.9)

Position: -118
Score: 4.3
Sequence: TTGGAATCGATTACAA
Locus tag: SUB1763
Name: treP
Funciton: Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
Locus tag: SUB1762
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
treP
Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)

Position: -80
Score: 4.6
Sequence: TAGAAAGCGGTTTTAA
Locus tag: SUB1103
Name: acoA
Funciton: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
Locus tag: SUB1102
Name: acoB
Funciton: Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)
acoA
Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
acoB
Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)

Position: -88
Score: 4.2
Sequence: CTGATAACGCATTCAT
Locus tag: SUB0993
Name: phnA
Funciton: Zn-ribbon-containing protein involved in phosphonate metabolism
phnA
Zn-ribbon-containing protein involved in phosphonate metabolism

Position: -80
Score: 4.3
Sequence: AATCAAGCGCTTTCTT
Locus tag: SUB1752
Name: ahpC
Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Locus tag: SUB1753
Name: ahpF
Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
ahpC
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
ahpF
Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)

Position: -94
Score: 4.3
Sequence: CTGAAAACATTTACAA
Locus tag: SUB1296
Name: typA
Funciton: GTP-binding protein TypA/BipA
typA
GTP-binding protein TypA/BipA

Position: -189
Score: 4.5
Sequence: AAGTAAACGTATACAT
Locus tag: SUB1328
Name: arcA
Funciton: Arginine deiminase (EC 3.5.3.6)
arcA
Arginine deiminase (EC 3.5.3.6)

Position: -71
Score: 4.4
Sequence: TTAGAAACGCTTACAA
Locus tag: SUB1329
Name: arcR
Funciton: Arginine catabolism (ADI pathway) transcriptional regulator ArcR, Crp-Fnr family
arcR
Arginine catabolism (ADI pathway) transcriptional regulator ArcR, Crp-Fnr family

Position: -36
Score: 4.1
Sequence: ATTAAAACGTTAAATT
Locus tag: SUB1001
Name: pfk
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: SUB1000
Name: pyk
Funciton: Pyruvate kinase (EC 2.7.1.40)
pfk
6-phosphofructokinase (EC 2.7.1.11)
pyk
Pyruvate kinase (EC 2.7.1.40)

Position: -70
Score: 4.5
Sequence: ATAAAAACCTTTTCAT
Locus tag: SUB1250
Name: rheA
Funciton: Cold-shock DEAD-box protein A
rheA
Cold-shock DEAD-box protein A

Position: -130
Score: 5
Sequence: TTGAAAACGTTTTAAA
Locus tag: SUB1482
Name: manL
Funciton: PTS system, mannose-specific IIAB components
manL
PTS system, mannose-specific IIAB components

Position: -156
Score: 4.3
Sequence: TAGTAATCGTTTGCAA
Locus tag: SUB1461
Name: lacR2
Funciton: Lactose phosphotransferase system transcriptional regulator LacR, DeoR family
lacR2
Lactose phosphotransferase system transcriptional regulator LacR, DeoR family

Position: -28
Score: 4.6
Sequence: CAGAAAACGATTTCAA
Locus tag: SUB0126
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -40
Score: 5.1
Sequence: AAGAAAGCGCTTTCTA
Locus tag: SUB1394
Name: atoB
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) / Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: SUB1395
Name: atoD
Funciton: Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
Locus tag: SUB1396
Name: atoA
Funciton: Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
Locus tag: SUB1397
Name: bdhA
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: SUB1398
Name: bdhP
Funciton: D-beta-hydroxybutyrate permease
atoB
3-ketoacyl-CoA thiolase (EC 2.3.1.16) / Acetyl-CoA acetyltransferase (EC 2.3.1.9)
atoD
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
atoA
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
bdhA
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
bdhP
D-beta-hydroxybutyrate permease

Position: -219
Score: 4.4
Sequence: TTGAAATGGTTTACAA
Locus tag: SUB0955
Name: coaA
Funciton: Pantothenate kinase (EC 2.7.1.33)
coaA
Pantothenate kinase (EC 2.7.1.33)

Position: -32
Score: 4.1
Sequence: TTGGAAGCGCCTACAT
Locus tag: SUB1738
Name: pepD2
Funciton: Dipeptidase (EC 3.4.-.-)
pepD2
Dipeptidase (EC 3.4.-.-)

Position: -133
Score: 4.6
Sequence: TTTGAAACGCTTTCAT
Locus tag: SUB1263
Name: gpmA
Funciton: 2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)

Position: -32
Score: 4.1
Sequence: CTGAAAGCGTAAACAA
Locus tag: SUB0543
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: SUB0544
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: SUB0545
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component

Position: -48
Score: 4.8
Sequence: TTGTAAGCGTTTTATA
Locus tag: SUB1705
Name: sorD
Funciton: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
Locus tag: SUB1704
Name: srlM
Funciton: Sorbitol operon transcription regulator
Locus tag: SUB1703
Name: srlR
Funciton: Glucitol operon activator protein
Locus tag: SUB1702
Name: srlA
Funciton: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: SUB1701
Name: srlE
Funciton: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
Locus tag: SUB1700
Name: srlB
Funciton: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69)
sorD
Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
srlM
Sorbitol operon transcription regulator
srlR
Glucitol operon activator protein
srlA
Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
srlE
Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
srlB
Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69)

Position: -45
Score: 4.8
Sequence: AAGAAAACGGTTACAA
Locus tag: SUB1312
Name: rbsR
Funciton: Ribose utilization transcriptional regulator, LacI family
Locus tag: SUB1311
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: SUB1310
Name: rbsD
Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: SUB1309
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: SUB1308
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: SUB1307
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
rbsR
Ribose utilization transcriptional regulator, LacI family
rbsK
Ribokinase (EC 2.7.1.15)
rbsD
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
rbsA
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
rbsC
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
rbsB
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)

Position: -56
Score: 4.2
Sequence: TGGTAAGCGTTTTCCT
Locus tag: SUB1583
Name: pck
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pck
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -30
Score: 4.5
Sequence: AAGATAACGGTTTCAA
Locus tag: SUB1204
Name: eda2
Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: SUB1203
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: SUB1202
Name: uxuA
Funciton: Mannonate dehydratase (EC 4.2.1.8)
Locus tag: SUB1201
Name: kduD
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
eda2
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxuA
Mannonate dehydratase (EC 4.2.1.8)
kduD
D-mannonate oxidoreductase (EC 1.1.1.57)

Position: -120
Score: 4.3
Sequence: TAGAAAACGCTTTACA
Locus tag: SUB0236
Name: ptsG
Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: SUB0237
Name: rgfB
Funciton: Exodeoxyribonuclease III (EC 3.1.11.2)
ptsG
PTS system glucose-specific EIICBA component (EC 2.7.1.69)
rgfB
Exodeoxyribonuclease III (EC 3.1.11.2)

Position: -117
Score: 4.3
Sequence: TTGTAATCGATTCCAA
Locus tag: SUB1764
Name: treR
Funciton: Trehalose utilization transcriptional regulator TreR, GntR family
treR
Trehalose utilization transcriptional regulator TreR, GntR family

Position: -75
Score: 4.4
Sequence: ATAATAGCGGTTTCAA
Locus tag: SUB0869
Name: xylH
Funciton: 4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH
Locus tag: SUB0868
Name: apbE
Funciton: Predicted thiamine biosynthesis lipoprotein
xylH
4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH
apbE
Predicted thiamine biosynthesis lipoprotein

Position: -78
Score: 4
Sequence: ATGGAAGGGCTTGCAT
Locus tag: SUB1260
Name: fdhC
Funciton: Predicted formate transporter
fdhC
Predicted formate transporter

Position: -53
Score: 3.9
Sequence: CTGCAAACGGTTGCAT
Locus tag: SUB1143
Name: malE
Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: SUB1144
Name: malF
Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: SUB1145
Name: malG
Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
malE
Maltose/maltodextrin ABC transporter, substrate-binding protein
malF
Maltose/maltodextrin ABC transporter, permease protein 1
malG
Maltose/maltodextrin ABC transporter, permease protein 2

Position: -72
Score: 4.5
Sequence: TTGAAAGTGGTTTCAA
Locus tag: SUB0536
Name: ccpA
Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family
ccpA
Carbon catabolism global transcriptional regulator CcpA, LacI family

Position: -28
Score: 4
Sequence: TTGATAGGGCTTACAG
Locus tag: SUB1650
Name: nanR
Funciton: Sialic acid utilization transcriptional regulator NanR, RpiR family
nanR
Sialic acid utilization transcriptional regulator NanR, RpiR family

Position: -76
Score: 4.9
Sequence: TTGAAAACGCTTTATT
Locus tag: SUB1658
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SUB1657
Name: nanV
Funciton: N-acetylneuraminate ABC transporter, permease protein 1
Locus tag: SUB1656
Name: nanW
Funciton: N-acetylneuraminate ABC transporter, permease protein 2
Locus tag: SUB1655
Name: nanU
Funciton: N-acetylneuraminate ABC transporter, substrate-binding protein
Locus tag: SUB1654
Name: yjgK
Funciton: Conserved hypothetical protein
Locus tag: SUB1653
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: SUB1652
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanV
N-acetylneuraminate ABC transporter, permease protein 1
nanW
N-acetylneuraminate ABC transporter, permease protein 2
nanU
N-acetylneuraminate ABC transporter, substrate-binding protein
yjgK
Conserved hypothetical protein
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)

Position: -59
Score: 4.4
Sequence: ATGAAAACGGTATAAT
Locus tag: SUB1375
Name: raiA
Funciton: Ribosome-associated protein Y
raiA
Ribosome-associated protein Y

Position: -30
Score: 4.3
Sequence: AAGAAACCGCTTACCT
Locus tag: SUB1433
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
Locus tag: SUB1432
Name: glpD
Funciton: Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Locus tag: SUB1431
Name: glpF
Funciton: Glycerol uptake facilitator protein
glpK
Glycerol kinase (EC 2.7.1.30)
glpD
Alpha-glycerophosphate oxidase (EC 1.1.3.21)
glpF
Glycerol uptake facilitator protein

Position: -54
Score: 4.3
Sequence: ATGTCAGCGTTTCCAT
Locus tag: SUB0997
Name: mtlA
Funciton: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SUB0996
Name: mtlR
Funciton: Mannitol operon antiterminator, BglG family
Locus tag: SUB0995
Name: mtlF
Funciton: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: SUB0994
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
mtlA
Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
mtlR
Mannitol operon antiterminator, BglG family
mtlF
Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)

Position: -34
Score: 4.5
Sequence: ATGAAAGCGGTTAATA
Locus tag: SUB0946
Name: pgm
Funciton: Phosphoglucomutase (EC 5.4.2.2)
pgm
Phosphoglucomutase (EC 5.4.2.2)

Position: -34
Score: 4.8
Sequence: TTGTAAACGGTTACAA
Locus tag: SUB0042
Name: bgaC
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: SUB0043
Name: agaB
Funciton: Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: SUB0044
Name: agaC
Funciton: Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: SUB0045
Name: agaD
Funciton: Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: SUB0046
Name: agaE
Funciton: Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)
bgaC
Beta-galactosidase (EC 3.2.1.23)
agaB
Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
agaC
Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
agaD
Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
agaE
Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)

Position: -94
Score: 4.4
Sequence: AAGAAAGCGTAATCAA
Locus tag: SUB0666
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SUB0667
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SUB0668
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SUB0669
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SUB0670
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SUB0671
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SUB0672
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SUB0673
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpB
ATP synthase A chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -56
Score: 4.3
Sequence: TTGAAATCGTTACCAA
Locus tag: SUB1058
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabD
Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)

Position: -101
Score: 4.7
Sequence: AAGTAAACGTTTTTAT
Locus tag: SUB1573
Name: glpF2
Funciton: Glycerol uptake facilitator protein
glpF2
Glycerol uptake facilitator protein

Position: -144
Score: 4.3
Sequence: TGATAAGCGTTTTCAA
Locus tag: SUB0661
Name: glgB
Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Locus tag: SUB0662
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SUB0663
Name: glgD
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SUB0664
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgD
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)

Position: -75
Score: 4.3
Sequence: TTGCAAACGATTACTA
Locus tag: SUB1460
Name: gatA
Funciton: PTS system, galactose-specific IIA component (EC 2.7.1.69)
Locus tag: SUB1459
Name: gatB
Funciton: PTS system, galactose-specific IIB component (EC 2.7.1.69)
Locus tag: SUB1458
Name: gatC
Funciton: PTS system, galactose-specific IIC component (EC 2.7.1.69)
Locus tag: SUB1457
Name: lacA1
Funciton: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
Locus tag: SUB1456
Name: lacB1
Funciton: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
Locus tag: SUB1455
Name: lacC1
Funciton: Putative tagatose-6-phosphate kinase
Locus tag: SUB1454
Name: lacD1
Funciton: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
gatA
PTS system, galactose-specific IIA component (EC 2.7.1.69)
gatB
PTS system, galactose-specific IIB component (EC 2.7.1.69)
gatC
PTS system, galactose-specific IIC component (EC 2.7.1.69)
lacA1
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
lacB1
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
lacC1
Putative tagatose-6-phosphate kinase
lacD1
Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)

Position: -137
Score: 3.8
Sequence: AAGAAAACATTTCAAA
Position: -60
Score: 3.9
Sequence: TTGTAAGGGTTACCAT
Locus tag: SUB1223
Name: ptsH
Funciton: Phosphotransferase system, HPr-related protein
Locus tag: SUB1222
Name: ptsI
Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
ptsH
Phosphotransferase system, HPr-related protein
ptsI
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)

Position: -72
Score: 4.5
Sequence: TTGGAAGCGTTTTATT
Locus tag: SUB0877
Name: naoX
Funciton: Predicted NADH oxidase
naoX
Predicted NADH oxidase

Position: -33
Score: 4
Sequence: GTAAAAACGGTTACAA
Locus tag: SUB0417
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -37
Score: 4.7
Sequence: ATAAAAACGTTTACTT
Locus tag: SUB1574
Name: pepX
Funciton: Xaa-Pro dipeptidyl-peptidase
pepX
Xaa-Pro dipeptidyl-peptidase

Position: -176
Score: 4.1
Sequence: TTGAAAGCTATTTAAT
Locus tag: SUB0687
Name: aat
Funciton: Aspartate aminotransferase (EC 2.6.1.1)
aat
Aspartate aminotransferase (EC 2.6.1.1)

Position: -60
Score: 4.4
Sequence: TTGTAACCGATTTCAG
Locus tag: SUB0748
Name: fruR
Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: SUB0749
Name: fruB
Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: SUB0750
Name: fruA
Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
fruR
Fructose utilization transcriptional regulator FruR, DeoR family
fruB
1-phosphofructokinase (EC 2.7.1.56)
fruA
Fructose-specific PTS system, IIABC component (EC 2.7.1.69)

Position: -59
Score: 4.3
Sequence: CGGAAATCGTTTTCAA
Locus tag: SUB1533
Name: yscN
Funciton: Predicted oxidoreductase, aldo/keto reductase family
yscN
Predicted oxidoreductase, aldo/keto reductase family

Position: -103
Score: 3.9
Sequence: TAAAAAAGGATTTCTA
Position: -46
Score: 3.9
Sequence: CGGAAAACGTTTAATT
Locus tag: SUB1427
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
tkt
Transketolase (EC 2.2.1.1)

Position: -76
Score: 4.5
Sequence: TTTAAAACGCTTTCAC
Locus tag: SUB1727
Name: sgaT
Funciton: Ascorbate-specific PTS system, IIC component
Locus tag: SUB1726
Name: sgaB
Funciton: Ascorbate-specific PTS system, IIB component (EC 2.7.1.69)
Locus tag: SUB1725
Name: sgaC
Funciton: Ascorbate-specific PTS system, IIA component (EC 2.7.1.-)
Locus tag: SUB1724
Name: sgaH
Funciton: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
Locus tag: SUB1723
Name: sgaU
Funciton: L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)
Locus tag: SUB1722
Name: sgaE
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
sgaT
Ascorbate-specific PTS system, IIC component
sgaB
Ascorbate-specific PTS system, IIB component (EC 2.7.1.69)
sgaC
Ascorbate-specific PTS system, IIA component (EC 2.7.1.-)
sgaH
3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
sgaU
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)
sgaE
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

Position: -149
Score: 4.6
Sequence: CAGAAAGCGCTATCAA
Locus tag: SUB0304
Name: susT1
Funciton: Fructooligosaccharides ABC transporter, permease protein 1
Locus tag: SUB0305
Name: susT2
Funciton: Fructooligosaccharides ABC transporter, permease protein 2
Locus tag: SUB0306
Name: susX
Funciton: Fructooligosaccharides ABC transporter, substrate-binding protein
Locus tag: SUB0307
Name: susH
Funciton: Fructooligosaccharides hydrolase
susT1
Fructooligosaccharides ABC transporter, permease protein 1
susT2
Fructooligosaccharides ABC transporter, permease protein 2
susX
Fructooligosaccharides ABC transporter, substrate-binding protein
susH
Fructooligosaccharides hydrolase

Position: -85
Score: 3.9
Sequence: TTGAAAAGGGATTCTT
Locus tag: SUB0235
Name: malR
Funciton: Maltose utilization transcriptional regulator MalR, LacI family
malR
Maltose utilization transcriptional regulator MalR, LacI family

Position: -182
Score: 4.2
Sequence: CAGAAAGGGTTTACAA
Locus tag: SUB0797
Name: lacT
Funciton: Predicted transcription antiterminator LacT, BglG family
Locus tag: SUB0798
Name: lacF
Funciton: Lactose-specific PTS system, IIA component (EC 2.7.1.69)
Locus tag: SUB0799
Name: lacE
Funciton: Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SUB0800
Name: lacG
Funciton: 6-phospho-beta-galactosidase (EC 3.2.1.85)
lacT
Predicted transcription antiterminator LacT, BglG family
lacF
Lactose-specific PTS system, IIA component (EC 2.7.1.69)
lacE
Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
lacG
6-phospho-beta-galactosidase (EC 3.2.1.85)
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