Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcpA in Streptococcus suis 05ZYH33

Properties
Regulator type: Transcription factor
TF locus tag: SSU05_1372
Regulator family: LacI
Regulation mode:
Biological process: Global catabolite repression
Effector: Fructose-1,6-bisphosphate; HPr, phosphocarrier protein
Regulog: CcpA - Streptococcaceae
Statistics of regulated genes:
- Genes 173
- Operons 67
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 968 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -113
Score: 4.6
Sequence: ATGTAAACATTTTCAA
Locus tag: SSU05_1076
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.1.27)
ldh
L-lactate dehydrogenase (EC 1.1.1.27)

Position: -27
Score: 4.5
Sequence: AGGAAAACGCTTTAAA
Locus tag: SSU05_0135
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -174
Score: 4
Sequence: ATGCAACCGCTTACCT
Locus tag: SSU05_0448
Name: manR
Funciton: Predicted N-acetylgalactosamine utilization transcriptional regulator ManR, GntR family
manR
Predicted N-acetylgalactosamine utilization transcriptional regulator ManR, GntR family

Position: -155
Score: 4.8
Sequence: AATAAAACGCTTACAT
Locus tag: SSU05_0630
Name: hexB
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hexB
Beta-hexosaminidase (EC 3.2.1.52)

Position: -114
Score: 3.8
Sequence: ATATAAACATATTCAA
Locus tag: SSU05_1311
Name: SUB1370
Funciton: Hypothetical protein / zinc carboxypeptidase
SUB1370
Hypothetical protein / zinc carboxypeptidase

Position: -32
Score: 4.3
Sequence: AAGAATACGATTACAA
Locus tag: SSU05_0360
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: SSU05_0361
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
galK
Galactokinase (EC 2.7.1.6)
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)

Position: -31
Score: 4.2
Sequence: ACGCAAACGTTTTCAA
Locus tag: SSU05_0259
Name: drrA
Funciton: Daunorubicin resistance ATP-binding protein drrA
Locus tag: SSU05_0258
Name: drrA
Funciton: Daunorubicin resistance ATP-binding protein drrA
Locus tag: SSU05_0257
Name: drrB
Funciton: Daunorubicin resistance transmembrane protein drrB
Locus tag: SSU05_0256
Name: drrC
Funciton: Daunorubicin resistance transmembrane protein drrC
drrA
Daunorubicin resistance ATP-binding protein drrA
drrA
Daunorubicin resistance ATP-binding protein drrA
drrB
Daunorubicin resistance transmembrane protein drrB
drrC
Daunorubicin resistance transmembrane protein drrC

Position: -135
Score: 4.5
Sequence: TTGAAACCACTTTCAA
Locus tag: SSU05_1373
Name: pepQ
Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9)
pepQ
Xaa-Pro dipeptidase (EC 3.4.13.9)

Position: -128
Score: 4.2
Sequence: TTGAAATCGGATACAA
Locus tag: SSU05_0231
Name: treP
Funciton: Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
Locus tag: SSU05_0230
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
treP
Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)

Position: -36
Score: 4.2
Sequence: AAGAAAACGGTTCAAT
Locus tag: SSU05_1841
Name: acoA
Funciton: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
Locus tag: SSU05_1840
Name: acoB
Funciton: Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)
acoA
Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
acoB
Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)

Position: -89
Score: 4.3
Sequence: CTGAAAACATTTACAA
Locus tag: SSU05_0468
Name: typA
Funciton: GTP-binding protein TypA/BipA
typA
GTP-binding protein TypA/BipA

Position: -147
Score: 3.9
Sequence: ATGAAAACGCCTCAAT
Position: -105
Score: 4
Sequence: ATGAAAACGATTTTTC
Locus tag: SSU05_0543
Name: pfk
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: SSU05_0544
Name: pyk
Funciton: Pyruvate kinase (EC 2.7.1.40)
pfk
6-phosphofructokinase (EC 2.7.1.11)
pyk
Pyruvate kinase (EC 2.7.1.40)

Position: -166
Score: 4.4
Sequence: ATGAAAACGTATTATT
Locus tag: SSU05_1574
Name: rheA
Funciton: Cold-shock DEAD-box protein A
rheA
Cold-shock DEAD-box protein A

Position: -91
Score: 4.2
Sequence: CTGTAATCGTTTTATA
Position: -59
Score: 4.4
Sequence: ATGAAAGCCCATTCAA
Locus tag: SSU05_1778
Name: manL
Funciton: PTS system, mannose-specific IIAB components
Locus tag: SSU05_1779
Name: manM
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: SSU05_1780
Name: manN
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Locus tag: SSU05_1781
Name: manO
Funciton: Putative regulator of the mannose operon, ManO
manL
PTS system, mannose-specific IIAB components
manM
PTS system, mannose-specific IIC component (EC 2.7.1.69)
manN
PTS system, mannose-specific IID component (EC 2.7.1.69)
manO
Putative regulator of the mannose operon, ManO

Position: -102
Score: 4.8
Sequence: TATAAAACGCTTACAT
Locus tag: SSU05_1221
Name: hylD
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
Locus tag: SSU05_1220
Name: ugl
Funciton: Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
Locus tag: SSU05_1219
Name: hylE
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
Locus tag: SSU05_1218
Name: hylF
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
Locus tag: SSU05_1217
Name: hylG
Funciton: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
Locus tag: SSU05_1216
Name: yajC
Funciton: Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Locus tag: SSU05_1215
Name: hyl
Funciton: Hyaluronate lyase precursor (EC 4.2.2.1)
Locus tag: SSU05_1214
Name: hyl
Funciton: Hyaluronate lyase precursor (EC 4.2.2.1)
Locus tag: SSU05_1213
Name: hyl
Funciton: Hyaluronate lyase precursor (EC 4.2.2.1)
Locus tag: SSU05_1212
Name: hyl
Funciton: Hyaluronate lyase precursor (EC 4.2.2.1)
hylD
PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
ugl
Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
hylE
PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
hylF
PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
hylG
PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
yajC
Preprotein translocase subunit YajC (TC 3.A.5.1.1)
hyl
Hyaluronate lyase precursor (EC 4.2.2.1)
hyl
Hyaluronate lyase precursor (EC 4.2.2.1)
hyl
Hyaluronate lyase precursor (EC 4.2.2.1)
hyl
Hyaluronate lyase precursor (EC 4.2.2.1)

Position: -85
Score: 3.9
Sequence: TAAAAACCGTTGACAA
Position: -42
Score: 4.4
Sequence: TTGTAAACGCTTTACA
Locus tag: SSU05_1225
Name: kduD
Funciton: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127)
Locus tag: SSU05_1224
Name: kduI
Funciton: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17)
Locus tag: SSU05_1223
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: SSU05_1222
Name: kdgA
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
kduD
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127)
kduI
5-keto-4-deoxyuronate isomerase (EC 5.3.1.17)
kdgK
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
kdgA
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Position: -110
Score: 4.6
Sequence: ATAAAAACGCTTGCAA
Position: -100
Score: 4.1
Sequence: TTGCAAACGGATTCAA
Locus tag: SSU05_2133
Name: malX
Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: SSU05_2134
Name: malC
Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: SSU05_2135
Name: malD
Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
Locus tag: SSU05_2136
Name: malA
Funciton: Maltodextrose utilization protein MalA
malX
Maltose/maltodextrin ABC transporter, substrate-binding protein
malC
Maltose/maltodextrin ABC transporter, permease protein 1
malD
Maltose/maltodextrin ABC transporter, permease protein 2
malA
Maltodextrose utilization protein MalA

Position: -171
Score: 4.9
Sequence: TAGTAAACGTTTTCTT
Position: -52
Score: 4.8
Sequence: TTGAAAACACTTTCAA
Locus tag: SSU05_1817
Name: scrA
Funciton: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: SSU05_1816
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
scrA
Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
scrK
Fructokinase (EC 2.7.1.4)

Position: -85
Score: 4.2
Sequence: CAGTAAACCCTTTCAA
Locus tag: SSU05_1060
Name: yjbM
Funciton: GTP pyrophosphokinase (EC 2.7.6.5)
Locus tag: SSU05_1059
Name: ppnK
Funciton: Predicted inorganic polyphosphate/ATP-NAD kinase
Locus tag: SSU05_1058
Name: yjbO
Funciton: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
yjbM
GTP pyrophosphokinase (EC 2.7.6.5)
ppnK
Predicted inorganic polyphosphate/ATP-NAD kinase
yjbO
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type

Position: -67
Score: 4.7
Sequence: CAGAAATCGCTTTCAT
Locus tag: SSU05_2076
Name: celR
Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SSU05_2075
Name: celB2
Funciton: Cellobiose-specific PTS, component EIIB
Locus tag: SSU05_2074
Name: celA2
Funciton: Cellobiose-specific PTS, component EIIA
Locus tag: SSU05_2073
Name: celA2
Funciton: Cellobiose-specific PTS, component EIIA
Locus tag: SSU05_2072
Name: SPy1322
Funciton: Conserved hypothetical protein
Locus tag: SSU05_2071
Name: celD2
Funciton: Cellobiose-specific PTS, component EIIC
celR
Cellobiose utilization transcriptional regulator CelR, BglG family
celB2
Cellobiose-specific PTS, component EIIB
celA2
Cellobiose-specific PTS, component EIIA
celA2
Cellobiose-specific PTS, component EIIA
SPy1322
Conserved hypothetical protein
celD2
Cellobiose-specific PTS, component EIIC

Position: -149
Score: 4.7
Sequence: ATGTAAGCGCTTAATT
Locus tag: SSU05_0211
Name: celQ
Funciton: Predicted cellobiose repressor, ROK family
Locus tag: SSU05_0210
Name: celQ
Funciton: Predicted cellobiose repressor, ROK family
celQ
Predicted cellobiose repressor, ROK family
celQ
Predicted cellobiose repressor, ROK family

Position: -17
Score: 4.7
Sequence: ATGACAACGCTTTCTA
Locus tag: SSU05_1160
Name: eda2
Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: SSU05_1159
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: SSU05_1158
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: SSU05_1157
Name: uxuA
Funciton: Mannonate dehydratase (EC 4.2.1.8)
Locus tag: SSU05_1156
Name: kduD
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
eda2
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxuA
Mannonate dehydratase (EC 4.2.1.8)
kduD
D-mannonate oxidoreductase (EC 1.1.1.57)

Position: -118
Score: 4.2
Sequence: TTGTATCCGATTTCAA
Locus tag: SSU05_0232
Name: treR
Funciton: Trehalose utilization transcriptional regulator TreR, GntR family
treR
Trehalose utilization transcriptional regulator TreR, GntR family

Position: -236
Score: 3.9
Sequence: ATGAAAGCGTACACAG
Locus tag: SSU05_1638
Name: gpmA
Funciton: 2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)

Position: -60
Score: 4.4
Sequence: TTGAAATCGTTTTCGA
Locus tag: SSU05_0655
Name: acuB
Funciton: Acetoin utilization protein AcuB
Locus tag: SSU05_0656
Name: acuB
Funciton: Acetoin utilization protein AcuB
acuB
Acetoin utilization protein AcuB
acuB
Acetoin utilization protein AcuB

Position: -132
Score: 4.1
Sequence: GTGTAAACGTTTTATA
Locus tag: SSU05_0265
Name: lrgA
Funciton: Antiholin-like protein LrgA
Locus tag: SSU05_0266
Name: lrgB
Funciton: LrgA-associated membrane protein LrgB
Locus tag: SSU05_0267
Name: lrgB
Funciton: LrgA-associated membrane protein LrgB
lrgA
Antiholin-like protein LrgA
lrgB
LrgA-associated membrane protein LrgB
lrgB
LrgA-associated membrane protein LrgB

Position: 6
Score: 4.4
Sequence: ATGAAAACATTTTTAA
Locus tag: SSU05_1558
Name: msmE
Funciton: Multiple sugar ABC transporter, substrate-binding protein
Locus tag: SSU05_1557
Name: msmF
Funciton: Multiple sugar ABC transporter, permease protein 2
Locus tag: SSU05_1556
Name: msmG
Funciton: Multiple sugar ABC transporter, permease protein 1
msmE
Multiple sugar ABC transporter, substrate-binding protein
msmF
Multiple sugar ABC transporter, permease protein 2
msmG
Multiple sugar ABC transporter, permease protein 1

Position: -42
Score: 4.5
Sequence: AAGAAAACGGTTGCAA
Locus tag: SSU05_0439
Name: raiA
Funciton: Ribosome-associated protein Y
raiA
Ribosome-associated protein Y

Position: -34
Score: 4.4
Sequence: ATGAAAGCGCAAACAA
Locus tag: SSU05_1957
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: SSU05_1958
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: SSU05_1959
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component

Position: -45
Score: 4.4
Sequence: TTGAAAACGGTATAAT
Locus tag: SSU05_1549
Name: ydgE
Funciton: Hypothetical protein
Locus tag: SSU05_1548
Name: livJ
Funciton: Branched-chain amino acid ABC transporter, substrate-binding protein
Locus tag: SSU05_1547
Name: livH
Funciton: Branched-chain amino acid ABC transporter, permease protein 1
Locus tag: SSU05_1546
Name: livM
Funciton: Branched-chain amino acid ABC transporter, permease protein 2
Locus tag: SSU05_1545
Name: livG
Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 1
Locus tag: SSU05_1544
Name: livG
Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 1
Locus tag: SSU05_1543
Name: livF
Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 2
ydgE
Hypothetical protein
livJ
Branched-chain amino acid ABC transporter, substrate-binding protein
livH
Branched-chain amino acid ABC transporter, permease protein 1
livM
Branched-chain amino acid ABC transporter, permease protein 2
livG
Branched-chain amino acid ABC transporter, ATP-binding protein 1
livG
Branched-chain amino acid ABC transporter, ATP-binding protein 1
livF
Branched-chain amino acid ABC transporter, ATP-binding protein 2

Position: -92
Score: 4.7
Sequence: AATTAAACGCTTACAA
Locus tag: SSU05_1178
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SSU05_1177
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SSU05_1176
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SSU05_1175
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SSU05_1174
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SSU05_1173
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SSU05_1172
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SSU05_1171
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpB
ATP synthase A chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: 0
Score: 5
Sequence: ATGGAAGCGTTTTCAA
Locus tag: SSU05_0722
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
Locus tag: SSU05_0723
Name: glpD
Funciton: Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Locus tag: SSU05_0724
Name: glpF
Funciton: Glycerol uptake facilitator protein
glpK
Glycerol kinase (EC 2.7.1.30)
glpD
Alpha-glycerophosphate oxidase (EC 1.1.3.21)
glpF
Glycerol uptake facilitator protein

Position: -52
Score: 5
Sequence: AATAAAGCGTTTTCAT
Locus tag: SSU05_1560
Name: agaL
Funciton: Alpha-galactosidase (EC 3.2.1.22)
agaL
Alpha-galactosidase (EC 3.2.1.22)

Position: -40
Score: 4.8
Sequence: ATGAAAGCGTTTAATA
Locus tag: SSU05_0686
Name: pgm
Funciton: Phosphoglucomutase (EC 5.4.2.2)
pgm
Phosphoglucomutase (EC 5.4.2.2)

Position: -197
Score: 4.8
Sequence: AAGAAAACGCTTCCAT
Locus tag: SSU05_0279
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)

Position: -27
Score: 4
Sequence: AGGTAAGCGGTTGCAT
Locus tag: SSU05_0449
Name: bgaC
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: SSU05_0450
Name: agaB
Funciton: Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: SSU05_0451
Name: agaC
Funciton: Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: SSU05_0452
Name: agaD
Funciton: Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: SSU05_0453
Name: agaE
Funciton: Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)
bgaC
Beta-galactosidase (EC 3.2.1.23)
agaB
Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
agaC
Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
agaD
Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
agaE
Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)

Position: -124
Score: 4.1
Sequence: TTGAAAGGTTTTTCAT
Position: -84
Score: 4.6
Sequence: TAGAAAGTGTTTTCAA
Locus tag: SSU05_0200
Name: pfl
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
pfl
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -14
Score: 4.7
Sequence: AATTAAGCGCTTACAT
Locus tag: SSU05_0212
Name: celZ2
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: SSU05_0213
Name: SP_0475
Funciton: Hypothetical protein
celZ2
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
SP_0475
Hypothetical protein

Position: -74
Score: 4.2
Sequence: TTGTTACCGTTTTCAG
Locus tag: SSU05_2132
Name: malM
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: SSU05_2131
Name: malM
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malM
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malM
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)

Position: -148
Score: 3.9
Sequence: CTGCAATCGTTTAAAA
Position: -70
Score: 5.1
Sequence: AAGAAAACGTTTACAA
Locus tag: SSU05_1444
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
Locus tag: SSU05_1443
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)

Position: -14
Score: 4.5
Sequence: AGGAAAACGTTTTTAT
Locus tag: SSU05_0392
Name: malM
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: SSU05_0393
Name: malM
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: SSU05_0394
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
malM
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malM
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)

Position: -17
Score: 4.2
Sequence: TTGAAAGGGTTTACTG
Locus tag: SSU05_1061
Name: yjbK
Funciton: Adenylate cyclase
Locus tag: SSU05_1062
Name: yjbK
Funciton: Adenylate cyclase
Locus tag: SSU05_1063
Name: yjbK
Funciton: Adenylate cyclase
Locus tag: SSU05_1064
Name: yjbK
Funciton: Adenylate cyclase
yjbK
Adenylate cyclase
yjbK
Adenylate cyclase
yjbK
Adenylate cyclase
yjbK
Adenylate cyclase

Position: -52
Score: 4.8
Sequence: TTGAAAGTGTTTTCAA
Locus tag: SSU05_1818
Name: scrB
Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: SSU05_1819
Name: scrR
Funciton: Sucrose operon repressor ScrR, LacI family
scrB
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
scrR
Sucrose operon repressor ScrR, LacI family

Position: -24
Score: 4.3
Sequence: GAGTAAACGTTTTCTT
Locus tag: SSU05_0268
Name: glpF2
Funciton: Glycerol uptake facilitator protein
glpF2
Glycerol uptake facilitator protein

Position: -70
Score: 4.8
Sequence: AAGGAAACGCTTTCAT
Locus tag: SSU05_1013
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SSU05_1014
Name: glgD
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SSU05_1015
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Locus tag: SSU05_1016
Name: glgB
Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgD
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)

Position: -91
Score: 4.5
Sequence: TTGAAAATGATTTCAA
Locus tag: SSU05_1201
Name: ptsH
Funciton: Phosphotransferase system, HPr-related protein
Locus tag: SSU05_1200
Name: ptsI
Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
ptsH
Phosphotransferase system, HPr-related protein
ptsI
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)

Position: 14
Score: 4.2
Sequence: TTGTAAACGGTTGCAG
Locus tag: SSU05_0822
Name: fruR
Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: SSU05_0823
Name: fruB
Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: SSU05_0824
Name: fruA
Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: SSU05_0825
Name: fruA
Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
fruR
Fructose utilization transcriptional regulator FruR, DeoR family
fruB
1-phosphofructokinase (EC 2.7.1.56)
fruA
Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
fruA
Fructose-specific PTS system, IIABC component (EC 2.7.1.69)

Position: 32
Score: 3.9
Sequence: GATAAAGCGTTATCAT
Locus tag: SSU05_2051
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)

Position: -55
Score: 4.6
Sequence: ATAGAAGCGTTTTCAT
Locus tag: SSU05_1667
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -104
Score: 4
Sequence: TTGAAAATGGTTACAG
Position: -36
Score: 4
Sequence: ATGTTATCGCTTTAAG
Locus tag: SSU05_1491
Name: licT
Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: SSU05_1490
Name: bglP
Funciton: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
Locus tag: SSU05_1489
Name: bglH
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
licT
Beta-glucoside bgl operon transcriptional antiterminator, BglG family
bglP
Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
bglH
6-phospho-beta-glucosidase (EC 3.2.1.86)

Position: -66
Score: 4.4
Sequence: TTGCAAGCCTTTTCAA
Locus tag: SSU05_0720
Name: hcaD
Funciton: NADH peroxidase (EC 1.11.1.1)
Locus tag: SSU05_0721
Name: hcaR
Funciton: Predicted NADH peroxidase transcriptional regulator
hcaD
NADH peroxidase (EC 1.11.1.1)
hcaR
Predicted NADH peroxidase transcriptional regulator

Position: -59
Score: 4.3
Sequence: TTGAAATCGGTAACAT
Locus tag: SSU05_0730
Name: naoX
Funciton: Predicted NADH oxidase
naoX
Predicted NADH oxidase

Position: -4
Score: 4.2
Sequence: ATTTATGCGCTTTAAT
Locus tag: SSU05_0197
Name: pepX
Funciton: Xaa-Pro dipeptidyl-peptidase
pepX
Xaa-Pro dipeptidyl-peptidase

Position: -236
Score: 4.3
Sequence: TTGTAATCGTATTCTT
Locus tag: SSU05_0359
Name: galR
Funciton: Galactose utilization transcriptional regulator GalR, LacI family
galR
Galactose utilization transcriptional regulator GalR, LacI family

Position: -64
Score: 4
Sequence: TTGTTTCCGCTTACAT
Locus tag: SSU05_2063
Name: sgaT
Funciton: Ascorbate-specific PTS system, IIC component
Locus tag: SSU05_2062
Name: sgaB
Funciton: Ascorbate-specific PTS system, IIB component (EC 2.7.1.69)
Locus tag: SSU05_2061
Name: sgaC
Funciton: Ascorbate-specific PTS system, IIA component (EC 2.7.1.-)
Locus tag: SSU05_2060
Name: sgaH
Funciton: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
Locus tag: SSU05_2059
Name: sgaU
Funciton: L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)
Locus tag: SSU05_2058
Name: sgaE
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
sgaT
Ascorbate-specific PTS system, IIC component
sgaB
Ascorbate-specific PTS system, IIB component (EC 2.7.1.69)
sgaC
Ascorbate-specific PTS system, IIA component (EC 2.7.1.-)
sgaH
3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
sgaU
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)
sgaE
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

Position: -43
Score: 4.1
Sequence: ATGTAAGCGCTATCTC
Locus tag: SSU05_1402
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SSU05_1401
Name: nanP
Funciton: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanP
PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)

Position: -28
Score: 4.3
Sequence: TGAAAAGCGTTTACAA
Locus tag: SSU05_2143
Name: yscN
Funciton: Predicted oxidoreductase, aldo/keto reductase family
yscN
Predicted oxidoreductase, aldo/keto reductase family

Position: -65
Score: 4
Sequence: TTGAAATCCTTGTCAA
Locus tag: SSU05_0328
Name: ropA
Funciton: Cell division trigger factor (EC 5.2.1.8)
ropA
Cell division trigger factor (EC 5.2.1.8)

Position: -115
Score: 4
Sequence: AGGAAGGCGTTTACAT
Locus tag: SSU05_1503
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -291
Score: 3.9
Sequence: TTGCAACCGTTGACAA
Locus tag: SSU05_0692
Name: merA
Funciton: Mercuric ion reductase (EC 1.16.1.1)
merA
Mercuric ion reductase (EC 1.16.1.1)

Position: -50
Score: 4.4
Sequence: AAGAAAACGCTTACGA
Locus tag: SSU05_1167
Name: uidB
Funciton: Glucuronide permease
Locus tag: SSU05_1166
Name: uidB
Funciton: Glucuronide permease
Locus tag: SSU05_1165
Name: uidB
Funciton: Glucuronide permease
Locus tag: SSU05_1164
Name: kdgK2
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: SSU05_1163
Name: uidA
Funciton: Beta-glucuronidase (EC 3.2.1.31)
Locus tag: SSU05_1162
Name: uidR
Funciton: Transcriptional regulator, GntR family
Locus tag: SSU05_1161
Name: uidR
Funciton: Transcriptional regulator, GntR family
uidB
Glucuronide permease
uidB
Glucuronide permease
uidB
Glucuronide permease
kdgK2
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
uidA
Beta-glucuronidase (EC 3.2.1.31)
uidR
Transcriptional regulator, GntR family
uidR
Transcriptional regulator, GntR family

Position: -142
Score: 4.2
Sequence: ATGTAAATGTTTGCAA
Locus tag: SSU05_1192
Name: rnc
Funciton: Ribonuclease III (EC 3.1.26.3)
Locus tag: SSU05_1191
Name: rnc
Funciton: Ribonuclease III (EC 3.1.26.3)
Locus tag: SSU05_1190
Name: yibB
Funciton: Chromosome segregation ATPase
rnc
Ribonuclease III (EC 3.1.26.3)
rnc
Ribonuclease III (EC 3.1.26.3)
yibB
Chromosome segregation ATPase

Position: -28
Score: 4
Sequence: TTGTTACCGTTAACAT
Position: -10
Score: 4.8
Sequence: AAGAAAACGTTTGCAA
Locus tag: SSU05_2065
Name: pulA
Funciton: Pullulanase (EC 3.2.1.41)
Locus tag: SSU05_2064
Name: pulA
Funciton: Pullulanase (EC 3.2.1.41)
pulA
Pullulanase (EC 3.2.1.41)
pulA
Pullulanase (EC 3.2.1.41)

Position: 4
Score: 4.5
Sequence: CAGAAAACGGTTACAA
Locus tag: SSU05_1340
Name: susT1
Funciton: Fructooligosaccharides ABC transporter, permease protein 1
Locus tag: SSU05_1339
Name: susT2
Funciton: Fructooligosaccharides ABC transporter, permease protein 2
Locus tag: SSU05_1338
Name: susX
Funciton: Fructooligosaccharides ABC transporter, substrate-binding protein
Locus tag: SSU05_1337
Name: susH
Funciton: Fructooligosaccharides hydrolase
susT1
Fructooligosaccharides ABC transporter, permease protein 1
susT2
Fructooligosaccharides ABC transporter, permease protein 2
susX
Fructooligosaccharides ABC transporter, substrate-binding protein
susH
Fructooligosaccharides hydrolase

Position: -164
Score: 4.6
Sequence: AAGAAAGGGTTTACAT
Locus tag: SSU05_1039
Name: lacT
Funciton: Predicted transcription antiterminator LacT, BglG family
Locus tag: SSU05_1038
Name: lacF
Funciton: Lactose-specific PTS system, IIA component (EC 2.7.1.69)
Locus tag: SSU05_1037
Name: lacE
Funciton: Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SSU05_1036
Name: lacG
Funciton: 6-phospho-beta-galactosidase (EC 3.2.1.85)
lacT
Predicted transcription antiterminator LacT, BglG family
lacF
Lactose-specific PTS system, IIA component (EC 2.7.1.69)
lacE
Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
lacG
6-phospho-beta-galactosidase (EC 3.2.1.85)

Position: -60
Score: 4.7
Sequence: ATGTGAGCGTTTTCAA
Locus tag: SSU05_0624
Name: arcA
Funciton: Arginine deiminase (EC 3.5.3.6)
Locus tag: SSU05_0625
Name: SPy1546
Funciton: Predicted acetyltransferase (EC 2.3.1.-)
Locus tag: SSU05_0626
Name: arcB
Funciton: Ornithine carbamoyltransferase (EC 2.1.3.3)
arcA
Arginine deiminase (EC 3.5.3.6)
SPy1546
Predicted acetyltransferase (EC 2.3.1.-)
arcB
Ornithine carbamoyltransferase (EC 2.1.3.3)

Position: -89
Score: 4.7
Sequence: CTAAAAACGTTTTCAA
Position: -32
Score: 4
Sequence: ATTGAAACGCTTACCT
Locus tag: SSU05_1088
Name: coaA
Funciton: Pantothenate kinase (EC 2.7.1.33)
coaA
Pantothenate kinase (EC 2.7.1.33)
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