Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcpA in Streptococcus pneumoniae TIGR4

Properties
Regulator type: Transcription factor
TF locus tag: SP_1999
Regulator family: LacI
Regulation mode:
Biological process: Global catabolite repression
Effector: Fructose-1,6-bisphosphate; HPr, phosphocarrier protein
Regulog: CcpA - Streptococcaceae
Statistics of regulated genes:
- Genes 171
- Operons 73
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 968 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -54
Score: 4.2
Sequence: AAGAAAACGATTACAC
Locus tag: SP_1853
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: SP_1852
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
galK
Galactokinase (EC 2.7.1.6)
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)

Position: -120
Score: 4.4
Sequence: CAGAAAGCGTTGTCAA
Locus tag: SP_0473
Name: celQ
Funciton: Predicted cellobiose repressor, ROK family
celQ
Predicted cellobiose repressor, ROK family

Position: -92
Score: 4.2
Sequence: GTGAAAACGATTTAAT
Locus tag: SP_1416
Name: queA
Funciton: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)

Position: -52
Score: 4.6
Sequence: ATTTAAGCGCTTTTAT
Locus tag: SP_0410
Name: shetA
Funciton: Exfoliative toxin A
shetA
Exfoliative toxin A

Position: -44
Score: 4.3
Sequence: ATATAATCGCTATCAA
Locus tag: SP_0057
Name: hexB
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hexB
Beta-hexosaminidase (EC 3.2.1.52)

Position: -66
Score: 4.8
Sequence: AAGAATGCGTTTTCAT
Locus tag: SP_0303
Name: bglA
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
bglA
6-phospho-beta-glucosidase (EC 3.2.1.86)

Position: -94
Score: 4.4
Sequence: ATGAAACTGTTTACAA
Position: -72
Score: 3.7
Sequence: AATAATGCGTTATAAT
Locus tag: SP_2026
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -63
Score: 4.1
Sequence: TTGGTATCGTTTACAA
Locus tag: SP_1884
Name: treP
Funciton: Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
Locus tag: SP_1883
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
treP
Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)

Position: -52
Score: 4.8
Sequence: ATAAAATCGCTTTCAA
Locus tag: SP_1722
Name: scrA
Funciton: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: SP_1721
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
scrA
Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
scrK
Fructokinase (EC 2.7.1.4)

Position: -55
Score: 4.9
Sequence: TATAAAGCGTTTTCAT
Locus tag: SP_1580
Name: msmK
Funciton: Multiple sugar ABC transporter, ATP-binding protein
msmK
Multiple sugar ABC transporter, ATP-binding protein

Position: -102
Score: 4.1
Sequence: ATGAAAACGATTTATC
Locus tag: SP_0896
Name: pfk
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: SP_0897
Name: pyk
Funciton: Pyruvate kinase (EC 2.7.1.40)
pfk
6-phosphofructokinase (EC 2.7.1.11)
pyk
Pyruvate kinase (EC 2.7.1.40)

Position: -68
Score: 4.6
Sequence: ATGAAAACGGTTTATA
Locus tag: SP_0284
Name: manL
Funciton: PTS system, mannose-specific IIAB components
Locus tag: SP_0283
Name: manM
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0282
Name: manN
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
manL
PTS system, mannose-specific IIAB components
manM
PTS system, mannose-specific IIC component (EC 2.7.1.69)
manN
PTS system, mannose-specific IID component (EC 2.7.1.69)

Position: -128
Score: 4.8
Sequence: TAGAAACCGTTTACAA
Locus tag: SP_0314
Name: hyl
Funciton: Hyaluronate lyase precursor (EC 4.2.2.1)
hyl
Hyaluronate lyase precursor (EC 4.2.2.1)

Position: -107
Score: 4.6
Sequence: ATGAAAGCGCTAATAT
Position: -63
Score: 3.8
Sequence: AAATAAAGGATTACAA
Locus tag: SP_0321
Name: hylD
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0322
Name: ugl
Funciton: Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
Locus tag: SP_0323
Name: hylE
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
Locus tag: SP_0324
Name: hylF
Funciton: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0325
Name: hylG
Funciton: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
Locus tag: SP_0326
Name: yajC
Funciton: Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Locus tag: SP_0327
Name: ohl
Funciton: Oligohyaluronate lyase (EC 4.2.2.-)
hylD
PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
ugl
Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
hylE
PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
hylF
PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
hylG
PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
yajC
Preprotein translocase subunit YajC (TC 3.A.5.1.1)
ohl
Oligohyaluronate lyase (EC 4.2.2.-)

Position: -44
Score: 4.6
Sequence: TTGACAACGGTTTCAT
Locus tag: SP_0645
Name: gatA
Funciton: PTS system, galactose-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0646
Name: gatB
Funciton: PTS system, galactose-specific IIB component (EC 2.7.1.69)
Locus tag: SP_0647
Name: gatC
Funciton: PTS system, galactose-specific IIC component (EC 2.7.1.69)
gatA
PTS system, galactose-specific IIA component (EC 2.7.1.69)
gatB
PTS system, galactose-specific IIB component (EC 2.7.1.69)
gatC
PTS system, galactose-specific IIC component (EC 2.7.1.69)

Position: -75
Score: 4.8
Sequence: AAGAAAGCGCTTTATT
Locus tag: SP_2186
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
Locus tag: SP_2185
Name: glpD
Funciton: Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Locus tag: SP_2184
Name: glpF
Funciton: Glycerol uptake facilitator protein
glpK
Glycerol kinase (EC 2.7.1.30)
glpD
Alpha-glycerophosphate oxidase (EC 1.1.3.21)
glpF
Glycerol uptake facilitator protein

Position: 0
Score: 4.1
Sequence: ATGAAAGCCATTATAA
Locus tag: SP_0238
Name: SP_0238
Funciton: Predicted transcriptional regulator, ACT family
Locus tag: SP_0239
Name: SP_0238
Funciton: Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94)
SP_0238
Predicted transcriptional regulator, ACT family
SP_0238
Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94)

Position: -111
Score: 3.9
Sequence: TTGATATCGGTTTTTT
Locus tag: SP_1602
Name: phnA
Funciton: Zn-ribbon-containing protein involved in phosphonate metabolism
phnA
Zn-ribbon-containing protein involved in phosphonate metabolism

Position: -117
Score: 4.3
Sequence: ACTAAAACGTTTACAT
Locus tag: SP_1220
Name: ldh
Funciton: L-lactate dehydrogenase (EC 1.1.1.27)
ldh
L-lactate dehydrogenase (EC 1.1.1.27)

Position: -126
Score: 4.2
Sequence: GTGTAATCGTTTTCTT
Locus tag: SP_1854
Name: galR
Funciton: Galactose utilization transcriptional regulator GalR, LacI family
galR
Galactose utilization transcriptional regulator GalR, LacI family

Position: -106
Score: 4.3
Sequence: TTGAAAGCGGATTTAT
Locus tag: SP_1097
Name: yjbM
Funciton: GTP pyrophosphokinase (EC 2.7.6.5)
Locus tag: SP_1098
Name: ppnK
Funciton: Predicted inorganic polyphosphate/ATP-NAD kinase
Locus tag: SP_1099
Name: yjbO
Funciton: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
yjbM
GTP pyrophosphokinase (EC 2.7.6.5)
ppnK
Predicted inorganic polyphosphate/ATP-NAD kinase
yjbO
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type

Position: -154
Score: 3.9
Sequence: AGGCAAACGCTTGCAT
Locus tag: SP_0636
Name: drrA
Funciton: Daunorubicin resistance ATP-binding protein drrA
Locus tag: SP_0637
Name: drrB
Funciton: Daunorubicin resistance transmembrane protein drrB
Locus tag: SP_0638
Name: drrC
Funciton: Daunorubicin resistance transmembrane protein drrC
drrA
Daunorubicin resistance ATP-binding protein drrA
drrB
Daunorubicin resistance transmembrane protein drrB
drrC
Daunorubicin resistance transmembrane protein drrC

Position: -98
Score: 4.4
Sequence: TTGCAACCGTTTTCTA
Locus tag: SP_2108
Name: malX
Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: SP_2109
Name: malC
Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: SP_2110
Name: malD
Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
Locus tag: SP_2111
Name: malA
Funciton: Maltodextrose utilization protein MalA
malX
Maltose/maltodextrin ABC transporter, substrate-binding protein
malC
Maltose/maltodextrin ABC transporter, permease protein 1
malD
Maltose/maltodextrin ABC transporter, permease protein 2
malA
Maltodextrose utilization protein MalA

Position: -68
Score: 4.3
Sequence: ATGTAAGCGTTTGATA
Locus tag: SP_0754
Name: acuB
Funciton: Acetoin utilization protein AcuB
acuB
Acetoin utilization protein AcuB

Position: -102
Score: 4.4
Sequence: ATAAAAGCCTTTACAA
Locus tag: SP_0758
Name: ptsG
Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: SP_0759
Name: SP_0759
Funciton: Hypothetical protein
Locus tag: SP_0760
Name: rgfB
Funciton: Exodeoxyribonuclease III (EC 3.1.11.2)
ptsG
PTS system glucose-specific EIICBA component (EC 2.7.1.69)
SP_0759
Hypothetical protein
rgfB
Exodeoxyribonuclease III (EC 3.1.11.2)

Position: -79
Score: 5.1
Sequence: TAGAAAGCGTTTTCTT
Locus tag: SP_2152
Name: arcD
Funciton: Arginine/ornithine antiporter
Locus tag: SP_2153
Name: arcT
Funciton: Xaa-His dipeptidase (EC 3.4.13.3)
arcD
Arginine/ornithine antiporter
arcT
Xaa-His dipeptidase (EC 3.4.13.3)

Position: -137
Score: 4
Sequence: GAGAAAGGGTTTACAT
Locus tag: SP_0605
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)

Position: -137
Score: 4.1
Sequence: TTGTAAACGATACCAA
Locus tag: SP_1885
Name: treR
Funciton: Trehalose utilization transcriptional regulator TreR, GntR family
treR
Trehalose utilization transcriptional regulator TreR, GntR family

Position: -28
Score: 4.3
Sequence: ATGATAGCGATTAAAT
Locus tag: SP_1584
Name: codY
Funciton: Amino acid metabolism global transcriptional regulator CodY, CodY family
Locus tag: SP_1583
Name: pncA
Funciton: Nicotinamidase (EC 3.5.1.19)
codY
Amino acid metabolism global transcriptional regulator CodY, CodY family
pncA
Nicotinamidase (EC 3.5.1.19)

Position: -150
Score: 4.6
Sequence: TTGAAAGTGTTTACAA
Locus tag: SP_1999
Name: ccpA
Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family
ccpA
Carbon catabolism global transcriptional regulator CcpA, LacI family

Position: -72
Score: 4
Sequence: ATGTAAGGGCTTCAAT
Locus tag: SP_1470
Name: apbE
Funciton: Predicted thiamine biosynthesis lipoprotein
apbE
Predicted thiamine biosynthesis lipoprotein

Position: -85
Score: 4.4
Sequence: TTTAAAGTGCTTACAT
Locus tag: SP_1506
Name: ywcC
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31)
ywcC
6-phosphogluconolactonase (EC 3.1.1.31)

Position: -41
Score: 4.3
Sequence: CTGTAAGCATTTTCAA
Locus tag: SP_0668
Name: glcK
Funciton: Glucokinase (EC 2.7.1.2)
glcK
Glucokinase (EC 2.7.1.2)

Position: -30
Score: 4.9
Sequence: TTGAAAACGCTTAAAA
Locus tag: SP_2044
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -16
Score: 4.1
Sequence: ATGAAAGGGATAACAA
Locus tag: SP_2187
Name: hcaR
Funciton: Predicted NADH peroxidase transcriptional regulator
hcaR
Predicted NADH peroxidase transcriptional regulator

Position: -55
Score: 4
Sequence: TTTTAAAGGTTTTTAA
Locus tag: SP_0394
Name: mtlA
Funciton: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SP_0395
Name: mtlR
Funciton: Mannitol operon antiterminator, BglG family
Locus tag: SP_0396
Name: mtlF
Funciton: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0397
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
mtlA
Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
mtlR
Mannitol operon antiterminator, BglG family
mtlF
Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)

Position: -57
Score: 4.7
Sequence: ATGAAAGCGTTATAAT
Locus tag: SP_2206
Name: raiA
Funciton: Ribosome-associated protein Y
raiA
Ribosome-associated protein Y

Position: -77
Score: 4.4
Sequence: AAGTAAGCGTTCACAT
Locus tag: SP_2167
Name: fucK
Funciton: L-fuculokinase (EC 2.7.1.51)
Locus tag: SP_2166
Name: fucA
Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: SP_2165
Name: fucU
Funciton: L-fucose mutarotase (EC 5.1.3.-)
Locus tag: SP_2164
Name: fucV
Funciton: Predicted L-fucose-specific phosphotransferase system, EIIA component
Locus tag: SP_2163
Name: fucW
Funciton: Predicted L-fucose-specific phosphotransferase system, EIIB component
Locus tag: SP_2162
Name: fucX
Funciton: Predicted L-fucose-specific phosphotransferase system, EIIC component
Locus tag: SP_2161
Name: fucY
Funciton: Predicted L-fucose-specific phosphotransferase system, EIID component
Locus tag: SP_2160
Name: fucO
Funciton: Alpha-L-fucosidase
Locus tag: SP_2159
Name: fucL
Funciton: Fucolectin-related protein
Locus tag: SP_2158
Name: fucI
Funciton: L-fucose isomerase (EC 5.3.1.25)
fucK
L-fuculokinase (EC 2.7.1.51)
fucA
L-fuculose phosphate aldolase (EC 4.1.2.17)
fucU
L-fucose mutarotase (EC 5.1.3.-)
fucV
Predicted L-fucose-specific phosphotransferase system, EIIA component
fucW
Predicted L-fucose-specific phosphotransferase system, EIIB component
fucX
Predicted L-fucose-specific phosphotransferase system, EIIC component
fucY
Predicted L-fucose-specific phosphotransferase system, EIID component
fucO
Alpha-L-fucosidase
fucL
Fucolectin-related protein
fucI
L-fucose isomerase (EC 5.3.1.25)

Position: -64
Score: 4.5
Sequence: AAGAAACCGCTTTATT
Locus tag: SP_0839
Name: coaA
Funciton: Pantothenate kinase (EC 2.7.1.33)
coaA
Pantothenate kinase (EC 2.7.1.33)

Position: -102
Score: 4.5
Sequence: AGGAAAACGTTATCAT
Locus tag: SP_0749
Name: livJ
Funciton: Branched-chain amino acid ABC transporter, substrate-binding protein
Locus tag: SP_0750
Name: livH
Funciton: Branched-chain amino acid ABC transporter, permease protein 1
Locus tag: SP_0751
Name: livM
Funciton: Branched-chain amino acid ABC transporter, permease protein 2
Locus tag: SP_0752
Name: livG
Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 1
Locus tag: SP_0753
Name: livF
Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 2
livJ
Branched-chain amino acid ABC transporter, substrate-binding protein
livH
Branched-chain amino acid ABC transporter, permease protein 1
livM
Branched-chain amino acid ABC transporter, permease protein 2
livG
Branched-chain amino acid ABC transporter, ATP-binding protein 1
livF
Branched-chain amino acid ABC transporter, ATP-binding protein 2

Position: -38
Score: 4.5
Sequence: TTGAAAGCGATATAAT
Locus tag: SP_1621
Name: bglG
Funciton: Predicted transcription antiterminator, BglG family
Locus tag: SP_1620
Name: alsA
Funciton: Predictes allulose PTS system, component IIA
Locus tag: SP_1619
Name: alsB
Funciton: Predictes allulose PTS system, component IIA
Locus tag: SP_1618
Name: alsC
Funciton: Predictes allulose PTS system, component IIB
Locus tag: SP_1617
Name: alsD
Funciton: Predictes allulose PTS system, component IIBC
Locus tag: SP_1616
Name: alsE
Funciton: Allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
Locus tag: SP_1615
Name: tkt2
Funciton: Transketolase (EC 2.2.1.1)
bglG
Predicted transcription antiterminator, BglG family
alsA
Predictes allulose PTS system, component IIA
alsB
Predictes allulose PTS system, component IIA
alsC
Predictes allulose PTS system, component IIB
alsD
Predictes allulose PTS system, component IIBC
alsE
Allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
tkt2
Transketolase (EC 2.2.1.1)

Position: -110
Score: 4.5
Sequence: TTAAAAACGCTTGCAA
Locus tag: SP_2107
Name: malM
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: SP_2106
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
malM
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)

Position: -55
Score: 4.3
Sequence: TGGAAAGCGATTTCAG
Locus tag: SP_1898
Name: agaL
Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: SP_1897
Name: msmE
Funciton: Multiple sugar ABC transporter, substrate-binding protein
Locus tag: SP_1896
Name: msmF
Funciton: Multiple sugar ABC transporter, permease protein 2
Locus tag: SP_1895
Name: msmG
Funciton: Multiple sugar ABC transporter, permease protein 1
agaL
Alpha-galactosidase (EC 3.2.1.22)
msmE
Multiple sugar ABC transporter, substrate-binding protein
msmF
Multiple sugar ABC transporter, permease protein 2
msmG
Multiple sugar ABC transporter, permease protein 1

Position: -130
Score: 4.1
Sequence: TGGAAAAGGCTTTCTT
Locus tag: SP_0285
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)

Position: -37
Score: 4.3
Sequence: ATGAAAGCGCAAACTT
Locus tag: SP_0060
Name: bgaC
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: SP_0061
Name: agaB
Funciton: Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: SP_0062
Name: agaC
Funciton: Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: SP_0063
Name: agaD
Funciton: Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: SP_0064
Name: agaE
Funciton: Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)
bgaC
Beta-galactosidase (EC 3.2.1.23)
agaB
Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
agaC
Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
agaD
Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
agaE
Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)

Position: -78
Score: 4.5
Sequence: TTGAAATCGGTTACTA
Locus tag: SP_0459
Name: pfl
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
pfl
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -30
Score: 4.8
Sequence: TAGAAAACGCTTACAG
Locus tag: SP_1121
Name: glgB
Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Locus tag: SP_1122
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SP_1123
Name: glgD
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SP_1124
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgD
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)

Position: -63
Score: 4.4
Sequence: TTGACAACGCTTTCTG
Locus tag: SP_0474
Name: celZ2
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0475
Name: SP_0475
Funciton: Hypothetical protein
celZ2
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
SP_0475
Hypothetical protein

Position: -37
Score: 4.3
Sequence: ATAAATCCGCTTTCAA
Locus tag: SP_1096
Name: yjbK
Funciton: Adenylate cyclase
yjbK
Adenylate cyclase

Position: -140
Score: 4.9
Sequence: ATAAAAACGCTTACAA
Locus tag: SP_1491
Name: glpF2
Funciton: Glycerol uptake facilitator protein
glpF2
Glycerol uptake facilitator protein

Position: -29
Score: 4.9
Sequence: TATAAAACGTTTTCAA
Locus tag: SP_1976
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -50
Score: 4.8
Sequence: TATAAAGCGCTTTCTT
Locus tag: SP_0498
Name: hexA
Funciton: Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)
hexA
Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)

Position: -169
Score: 4.3
Sequence: ATAAAAACGGTTACAG
Locus tag: SP_0576
Name: licT
Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: SP_0577
Name: bglP
Funciton: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
Locus tag: SP_0578
Name: bglH
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
licT
Beta-glucoside bgl operon transcriptional antiterminator, BglG family
bglP
Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
bglH
6-phospho-beta-glucosidase (EC 3.2.1.86)

Position: -70
Score: 4.8
Sequence: AAGAAAACGCTTGCAT
Locus tag: SP_0268
Name: pulA
Funciton: Pullulanase (EC 3.2.1.41)
pulA
Pullulanase (EC 3.2.1.41)

Position: -68
Score: 4.3
Sequence: CTGAAATCGCTTTCCA
Locus tag: SP_1899
Name: msmR
Funciton: MSM (multiple sugar metabolism) operon regulatory protein
msmR
MSM (multiple sugar metabolism) operon regulatory protein

Position: -93
Score: 4.3
Sequence: TATTAAACGCTTCCAA
Locus tag: SP_1514
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SP_1513
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SP_1512
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SP_1511
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SP_1510
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SP_1509
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SP_1508
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SP_1507
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpB
ATP synthase A chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -32
Score: 5
Sequence: ATGTAAACGTTTACTT
Locus tag: SP_1331
Name: nanR
Funciton: Sialic acid utilization transcriptional regulator NanR, RpiR family
Locus tag: SP_1330
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SP_1329
Name: nanA2
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: SP_1328
Name: nanT
Funciton: Predicted sialic acid transporter
Locus tag: SP_1327
Name: yjgK
Funciton: Conserved hypothetical protein
Locus tag: SP_1326
Name: neuA
Funciton: Sialidase (EC 3.2.1.18)
Locus tag: SP_1325
Name: yjhC
Funciton: Predicted oxidoreductase (EC 1.1.1.-)
Locus tag: SP_1324
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
nanR
Sialic acid utilization transcriptional regulator NanR, RpiR family
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanA2
N-acetylneuraminate lyase (EC 4.1.3.3)
nanT
Predicted sialic acid transporter
yjgK
Conserved hypothetical protein
neuA
Sialidase (EC 3.2.1.18)
yjhC
Predicted oxidoreductase (EC 1.1.1.-)
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)

Position: -63
Score: 5.1
Sequence: TTGAAAGCGTTTTAAT
Locus tag: SP_1685
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SP_1684
Name: nanP
Funciton: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanP
PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)

Position: -71
Score: 4.5
Sequence: ATGAAATCGCATACAA
Locus tag: SP_1683
Name: nanU
Funciton: N-acetylneuraminate ABC transporter, substrate-binding protein
Locus tag: SP_1682
Name: nanV
Funciton: N-acetylneuraminate ABC transporter, permease protein 1
Locus tag: SP_1681
Name: nanW
Funciton: N-acetylneuraminate ABC transporter, permease protein 2
nanU
N-acetylneuraminate ABC transporter, substrate-binding protein
nanV
N-acetylneuraminate ABC transporter, permease protein 1
nanW
N-acetylneuraminate ABC transporter, permease protein 2

Position: -53
Score: 3.9
Sequence: TAGAAAATGTTATAAT
Locus tag: SP_0400
Name: ropA
Funciton: Cell division trigger factor (EC 5.2.1.8)
ropA
Cell division trigger factor (EC 5.2.1.8)

Position: -124
Score: 4.7
Sequence: AAGAAAGCGATTACTT
Locus tag: SP_1128
Name: eno
Funciton: Enolase (EC 4.2.1.11)
eno
Enolase (EC 4.2.1.11)

Position: -55
Score: 4.7
Sequence: AAGTAATCGCTTTCTT
Locus tag: SP_1127
Name: yuel
Funciton: Conserved hypothetical protein
yuel
Conserved hypothetical protein

Position: -90
Score: 4.5
Sequence: TTGGAAACGCTTTATT
Locus tag: SP_0305
Name: celB
Funciton: Cellobiose-specific PTS, component EIIB
Locus tag: SP_0306
Name: celR
Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SP_0307
Name: celR
Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SP_0308
Name: celA
Funciton: Cellobiose-specific PTS, component EIIA
Locus tag: SP_0309
Name: SP_0309
Funciton: Conserved hypothetical protein
Locus tag: SP_0310
Name: celD
Funciton: Cellobiose-specific PTS, component EIIC
celB
Cellobiose-specific PTS, component EIIB
celR
Cellobiose utilization transcriptional regulator CelR, BglG family
celR
Cellobiose utilization transcriptional regulator CelR, BglG family
celA
Cellobiose-specific PTS, component EIIA
SP_0309
Conserved hypothetical protein
celD
Cellobiose-specific PTS, component EIIC

Position: -34
Score: 4.5
Sequence: AAGCAAACGCTTACTT
Locus tag: SP_0715
Name: lctO
Funciton: Lactate 2-monooxygenase (EC 1.13.12.4)
lctO
Lactate 2-monooxygenase (EC 1.13.12.4)

Position: -68
Score: 4.3
Sequence: CAGAAAACGCTTCCTA
Locus tag: SP_1215
Name: yrhG
Funciton: Predicted permease
yrhG
Predicted permease

Position: -97
Score: 4.5
Sequence: TGGAAAGCGTTTTTAT
Locus tag: SP_1588
Name: merA
Funciton: Mercuric ion reductase (EC 1.16.1.1)
merA
Mercuric ion reductase (EC 1.16.1.1)

Position: -56
Score: 4.3
Sequence: TTGTAAAGGCTATCAA
Locus tag: SP_1717
Name: natA
Funciton: Na+ export ABC transporter, ATP-binding protein
Locus tag: SP_1716
Name: natB
Funciton: Na+ export ABC transporter, permease protein
natA
Na+ export ABC transporter, ATP-binding protein
natB
Na+ export ABC transporter, permease protein

Position: -150
Score: 4.6
Sequence: CAGAAAGCGCTATCAA
Locus tag: SP_1798
Name: susT1
Funciton: Fructooligosaccharides ABC transporter, permease protein 1
Locus tag: SP_1797
Name: susT2
Funciton: Fructooligosaccharides ABC transporter, permease protein 2
Locus tag: SP_1796
Name: susX
Funciton: Fructooligosaccharides ABC transporter, substrate-binding protein
Locus tag: SP_1795
Name: susH
Funciton: Fructooligosaccharides hydrolase
susT1
Fructooligosaccharides ABC transporter, permease protein 1
susT2
Fructooligosaccharides ABC transporter, permease protein 2
susX
Fructooligosaccharides ABC transporter, substrate-binding protein
susH
Fructooligosaccharides hydrolase

Position: -180
Score: 4.6
Sequence: ATGTAAAGGTTTACAA
Locus tag: SP_1187
Name: lacT
Funciton: Predicted transcription antiterminator LacT, BglG family
Locus tag: SP_1186
Name: lacF
Funciton: Lactose-specific PTS system, IIA component (EC 2.7.1.69)
Locus tag: SP_1185
Name: lacE
Funciton: Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SP_1184
Name: lacG
Funciton: 6-phospho-beta-galactosidase (EC 3.2.1.85)
lacT
Predicted transcription antiterminator LacT, BglG family
lacF
Lactose-specific PTS system, IIA component (EC 2.7.1.69)
lacE
Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
lacG
6-phospho-beta-galactosidase (EC 3.2.1.85)

Position: -53
Score: 4.4
Sequence: ATAAAAGCCTTTACAT
Locus tag: SP_0828
Name: rpiA
Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Locus tag: SP_0829
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: SP_0830
Name: SMU.1232c
Funciton: Conserved hypothetical protein
Locus tag: SP_0831
Name: punA
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
rpiA
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
deoB
Phosphopentomutase (EC 5.4.2.7)
SMU.1232c
Conserved hypothetical protein
punA
Purine nucleoside phosphorylase (EC 2.4.2.1)

Position: -114
Score: 4.4
Sequence: ATGTGAACGCTTACTT
Locus tag: SP_2168
Name: fucR
Funciton: L-fucose utilization transcriptional regulator FucR, DeoR family
fucR
L-fucose utilization transcriptional regulator FucR, DeoR family

Position: -70
Score: 4.5
Sequence: TTGAAAACGAATACAA
Locus tag: SP_2157
Name: fucZ
Funciton: Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22)
fucZ
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22)

Position: -38
Score: 4.6
Sequence: ATGTAATCGTTATCAA
Locus tag: SP_0090
Name: msmX
Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
Locus tag: SP_0091
Name: msmY
Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
Locus tag: SP_0092
Name: msmZ
Funciton: Multiple sugar ABC transporter, substrate-binding protein
msmX
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
msmY
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
msmZ
Multiple sugar ABC transporter, substrate-binding protein
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