Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Roseiflexus castenholzii DSM 13941

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Chloroflexia
Under regulation:
- Genes 10
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -241
Score: 55.8
Sequence: CAGTGTTCCGTAGGG...
Locus tag: Rcas_1431
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Rcas_1430
Name: null
Funciton: hypothetical protein
tenA
Thiaminase II (EC 3.5.99.2)
hypothetical protein

Position: -157
Score: 58.1
Sequence: AGGGGAGCCAGGTGA...
Locus tag: Rcas_0665
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Rcas_0666
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Rcas_0667
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Rcas_0668
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
thiX
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
thiZ
Hydroxymethylpyrimidine ABC transporter, ATPase component

Position: -180
Score: 71.7
Sequence: GGCGCCACTGGGGGA...
Locus tag: Rcas_4121
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Rcas_4122
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Rcas_4123
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Rcas_4124
Name: ecfAA
Funciton: ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiW
Substrate-specific component ThiW of predicted thiazole ECF transporter
ecfAA
ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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