Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Chloroflexus sp. Y-400-fl

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Chloroflexia
Under regulation:
- Genes 11
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -193
Score: 56.2
Sequence: GTGTTCCGTAGGGGC...
Locus tag: Chy400_0862
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
tenA
Thiaminase II (EC 3.5.99.2)

Position: -197
Score: 67.7
Sequence: TACGCGCTGCCAGGG...
Locus tag: Chy400_0456
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Chy400_0455
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Chy400_0454
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Chy400_0453
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
thiX
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
thiZ
Hydroxymethylpyrimidine ABC transporter, ATPase component

Position: -228
Score: 61.8
Sequence: ACTAATAAGCCAGGG...
Locus tag: Chy400_0401
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Chy400_0400
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Chy400_0399
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Position: -202
Score: 59.2
Sequence: ACAGCGTGTATGAGG...
Locus tag: Chy400_0859
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
Locus tag: Chy400_0858
Name: thiW-ecfAA
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter/ ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
Locus tag: Chy400_0857
Name: ecfT
Funciton: Transmembrane component of general energizing module of ECF transporters
cytX
Predicted hydroxymethylpyrimidine transporter CytX
thiW-ecfAA
Substrate-specific component ThiW of predicted thiazole ECF transporter/ ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
ecfT
Transmembrane component of general energizing module of ECF transporters
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