Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of GamR in Bacillus clausii KSM-K16

Properties
Regulator type: Transcription factor
TF locus tag: ABC0645
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucosamine utilization
Effector: Glucosamine-6-phosphate
Regulog: GamR - Bacillales
Statistics of regulated genes:
- Genes 6
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -60
Score: 4.8
Sequence: GAATTAGTAGTAACAACTTT
Locus tag: ABC0646
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
chiA
Chitinase (EC 3.2.1.14)

Position: -97
Score: 5.2
Sequence: AAATAGGTAGTTACAAATTT
Position: -73
Score: 5.7
Sequence: TGATTAGTAATTACAAATAT
Locus tag: ABC0643
Name: licH
Funciton: Cytoplasmic 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: ABC0642
Name: ywbA
Funciton: PTS system, predicted N-acetylglucosamine oligosaccharide-specific IIC component (EC 2.7.1.69)
Locus tag: ABC0641
Name: ywbB
Funciton: PTS system, predicted N-acetylglucosamine oligosaccharide-specific IIA component (EC 2.7.1.69)
Locus tag: ABC0640
Name: ywbC
Funciton: PTS system, predicted predicted N-acetylglucosamine oligosaccharide-specific IIB component (EC 2.7.1.69)
licH
Cytoplasmic 6-phospho-beta-glucosidase (EC 3.2.1.86)
ywbA
PTS system, predicted N-acetylglucosamine oligosaccharide-specific IIC component (EC 2.7.1.69)
ywbB
PTS system, predicted N-acetylglucosamine oligosaccharide-specific IIA component (EC 2.7.1.69)
ywbC
PTS system, predicted predicted N-acetylglucosamine oligosaccharide-specific IIB component (EC 2.7.1.69)

Position: -124
Score: 5.7
Sequence: ATATTTGTAATTACTAATCA
Position: -100
Score: 5.2
Sequence: AAATTTGTAACTACCTATTT
Locus tag: ABC0644
Name: null
Funciton: Predicted chitooligosaccharide deacetylase
Predicted chitooligosaccharide deacetylase
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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