Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of VanR in Xanthomonas axonopodis pv. citri str. 306

Properties
Regulator type: Transcription factor
TF locus tag: XAC0877
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Vanillate utilization
Effector: Vanillate
Regulog: VanR - Xanthomonadales
Statistics of regulated genes:
- Genes 3
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -246
Score: 4.7
Sequence: ATTGGCTCCATT
Position: -141
Score: 4.3
Sequence: TTTGGATCCCAA
Position: -88
Score: 4.4
Sequence: TTGGGATCCATT
Locus tag: XAC0878
Name: pcaH
Funciton: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
Locus tag: XAC0879
Name: ligA
Funciton: Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)
pcaH
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
ligA
Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)

Position: -159
Score: 4.5
Sequence: AATGGATCCCAA
Position: -106
Score: 4.3
Sequence: TTGGGATCCAAA
Position: -1
Score: 4.7
Sequence: AATGGAGCCAAT
Locus tag: XAC0877
Name: vanR
Funciton: Transcriptional regulator for ferulate or vanillate catabolism
vanR
Transcriptional regulator for ferulate or vanillate catabolism
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