Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of FadP in Variovorax paradoxus S110

Properties
Regulator type: Transcription factor
TF locus tag: Vapar_0809
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Comamonadaceae
Statistics of regulated genes:
- Genes 19
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 46 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -131
Score: 5.1
Sequence: AAGCACGGTCGTTCTT
Locus tag: Vapar_3374
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Vapar_3373
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Vapar_3372
Name: acdH2
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Vapar_3371
Name: null
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit
acdH2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Dioxygenases related to 2-nitropropane dioxygenase

Position: -32
Score: 5.5
Sequence: TCGAACGATCGTTCGC
Locus tag: Vapar_0572
Name: null
Funciton: FIG026291: Hypothetical periplasmic protein
FIG026291: Hypothetical periplasmic protein

Position: -87
Score: 5.2
Sequence: CAGCACGACCGTGCTA
Locus tag: Vapar_1274
Name: acdQ
Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
Locus tag: Vapar_1273
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
acdQ
Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
acdP
Acyl-CoA dehydrogenase family protein

Position: -36
Score: 5.7
Sequence: TAGAACGACCGTTCGT
Locus tag: Vapar_0809
Name: fadP
Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Vapar_0810
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Vapar_0811
Name: null
Funciton: hypothetical protein
Locus tag: Vapar_0812
Name: acdB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Vapar_0813
Name: null
Funciton: protein of unknown function DUF559
Locus tag: Vapar_0814
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Vapar_0815
Name: null
Funciton: alpha/beta hydrolase-like
Locus tag: Vapar_0816
Name: null
Funciton: TesB-like acyl-CoA thioesterase 2
Locus tag: Vapar_0817
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
Locus tag: Vapar_0818
Name: null
Funciton: hypothetical protein
Locus tag: Vapar_0819
Name: null
Funciton: DSBA oxidoreductase
Locus tag: Vapar_0820
Name: echH
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
fadP
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
hypothetical protein
acdB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
protein of unknown function DUF559
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
alpha/beta hydrolase-like
TesB-like acyl-CoA thioesterase 2
short-chain dehydrogenase/reductase SDR
hypothetical protein
DSBA oxidoreductase
echH
Enoyl-CoA hydratase (EC 4.2.1.17)
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