Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of FadP in Polaromonas sp. JS666

Properties
Regulator type: Transcription factor
TF locus tag: Bpro_3958
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Comamonadaceae
Statistics of regulated genes:
- Genes 15
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 46 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -35
Score: 5.7
Sequence: TAGAACGATCGTTCGT
Locus tag: Bpro_3958
Name: fadP
Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Bpro_3957
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Bpro_3956
Name: acdB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Bpro_3955
Name: null
Funciton: hypothetical protein
Locus tag: Bpro_3954
Name: null
Funciton: DNA methylase, putative
Locus tag: Bpro_3953
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
fadP
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
acdB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
hypothetical protein
DNA methylase, putative
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)

Position: -142
Score: 5.7
Sequence: TAGAACGACCGTTCTT
Locus tag: Bpro_3143
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Bpro_3142
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Bpro_3141
Name: acdH2
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Bpro_3140
Name: null
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit
acdH2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Dioxygenases related to 2-nitropropane dioxygenase

Position: -86
Score: 4.9
Sequence: AAGAACGGTCGTACTA
Locus tag: Bpro_2573
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Bpro_2572
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Bpro_2571
Name: null
Funciton: Phenylacetic acid degradation protein paaI
Locus tag: Bpro_2570
Name: acdH3
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Phenylacetic acid degradation protein paaI
acdH3
Acyl-CoA dehydrogenase (EC 1.3.99.3)

Position: -56
Score: 5.5
Sequence: AAGAACGACCGTTCTA
Locus tag: Bpro_4459
Name: null
Funciton: FIG026291: Hypothetical periplasmic protein
FIG026291: Hypothetical periplasmic protein
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