Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PsrA in Dechloromonas aromatica RCB

Properties
Regulator type: Transcription factor
TF locus tag: Daro_1543
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Various betaproteobacteria
Statistics of regulated genes:
- Genes 13
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 34 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -58
Score: 6
Sequence: ATTCAAACGTTCGTTTTATT
Locus tag: Daro_1549
Name: acdB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Daro_1550
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Daro_1551
Name: null
Funciton: hypothetical protein
Locus tag: Daro_1552
Name: null
Funciton: FIG026291: Hypothetical periplasmic protein
Locus tag: Daro_1553
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Daro_1554
Name: null
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
Locus tag: Daro_1555
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
acdB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
hypothetical protein
FIG026291: Hypothetical periplasmic protein
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Dioxygenases related to 2-nitropropane dioxygenase
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)

Position: -122
Score: 4.7
Sequence: TTTCCAACAGTCATTTGAAT
Position: -83
Score: 5.8
Sequence: TTTCAAACGTTTGTTTGAGA
Locus tag: Daro_1548
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -34
Score: 6
Sequence: ATTCAAACGAACGTATGAAT
Locus tag: Daro_1543
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
Locus tag: Daro_1544
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Daro_1545
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Daro_1546
Name: null
Funciton: DegV family protein
Locus tag: Daro_1547
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
DegV family protein
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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