Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PsrA in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type: Transcription factor
TF locus tag: PSPTO3508
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 11
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 69 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -68
Score: 4.8
Sequence: TTTCAAACAAACGTTTTGAC
Locus tag: PSPTO2192
Name: null
Funciton: Proteinase inhibitor
Proteinase inhibitor

Position: -180
Score: 5.7
Sequence: AATCAAACGGGCGTATGAAA
Locus tag: PSPTO3517
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: PSPTO3516
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Position: -113
Score: 5.6
Sequence: TTTCAAACACCTGTTTGACC
Locus tag: PSPTO0500
Name: acdH1
Funciton: probable acyl-CoA dehydrogenase
acdH1
probable acyl-CoA dehydrogenase

Position: -373
Score: 5.6
Sequence: ATACAAACGTTTGTTTGAAT
Locus tag: PSPTO2185
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: PSPTO2186
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit

Position: -31
Score: 5.6
Sequence: TTTCAAACGTTCGTTTGTTA
Locus tag: PSPTO3508
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family

Position: -89
Score: 5.8
Sequence: TTTCAAACGAGCGTATGTTT
Locus tag: PSPTO2726
Name: null
Funciton: Phosphoglycerate mutase family protein
Locus tag: PSPTO2725
Name: scp
Funciton: Sterol-binding domain protein
Phosphoglycerate mutase family protein
scp
Sterol-binding domain protein

Position: -180
Score: 5.3
Sequence: TATTAAACGCTTGTATGAAC
Locus tag: PSPTO0134
Name: algQ
Funciton: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
algQ
Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ

Position: -427
Score: 4.8
Sequence: CCTCAAACGGCAGTTTGAAT
Locus tag: PSPTO1565
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS
RNA polymerase sigma factor RpoS
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