Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PsrA in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type: Transcription factor
TF locus tag: VC1741
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Vibrionales
Statistics of regulated genes:
- Genes 9
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 49 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -81
Score: 5.6
Sequence: ATGTAAACACTTGTTTGATT
Locus tag: VC1993
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)

Position: -136
Score: 5.5
Sequence: TGTTAAACACTTGTTTAAAA
Locus tag: VC2758
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: VC2759
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)

Position: 69
Score: 5.7
Sequence: ATTtAAACggcTGTTTGAtT
Locus tag: VC1046
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: VC1047
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)

Position: 16
Score: 5.5
Sequence: TTTCAAACAGTTGTTTGATA
Locus tag: VC1741
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
Locus tag: VC1740
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -299
Score: 5.7
Sequence: ATTTAAACACTTGTTTAAGT
Locus tag: VC0734
Name: mdh
Funciton: Malate synthase (EC 2.3.3.9)
mdh
Malate synthase (EC 2.3.3.9)

Position: -130
Score: 5.6
Sequence: ATTTAAACAAGTGTTTGAGA
Locus tag: VC1985
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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