Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Roseiflexus sp. RS-1

Properties
Regulator type: Transcription factor
TF locus tag: RoseRS_4103
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Chloroflexia
Statistics of regulated genes:
- Genes 23
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 49 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -106
Score: 3.8
Sequence: CTGTTCCATCCATCACAA
Locus tag: RoseRS_0005
Name: fpr
Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
fpr
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)

Position: -73
Score: 5
Sequence: TTGTGATTATTATTGCAA
Position: -51
Score: 5.1
Sequence: TCGTGAAGTGTATCACGA
Locus tag: RoseRS_0596
Name: Cagg_2669
Funciton: Cytochrome c family protein
Locus tag: RoseRS_0597
Name: Cagg_2670
Funciton: hypothetical protein
Cagg_2669
Cytochrome c family protein
Cagg_2670
hypothetical protein

Position: -40
Score: 4.6
Sequence: TTGTGCAAGATTTCACGT
Locus tag: RoseRS_2002
Name: Cagg_1949
Funciton: GCN5-related N-acetyltransferase
Cagg_1949
GCN5-related N-acetyltransferase

Position: -44
Score: 4.4
Sequence: TTGTGAAAGTGTTCTCAA
Locus tag: RoseRS_0518
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: RoseRS_0517
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: RoseRS_0516
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: RoseRS_0515
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: RoseRS_0514
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: RoseRS_0513
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: RoseRS_0512
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: RoseRS_0511
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpB
ATP synthase A chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -48
Score: 5.3
Sequence: TTGTTCAGTATTTCACAA
Locus tag: RoseRS_1698
Name: hepT
Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
hepT
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)

Position: -157
Score: 4.3
Sequence: TAGTGCTACACTTCACAT
Locus tag: RoseRS_4103
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
rex
Redox-sensitive transcriptional regulator Rex

Position: -131
Score: 4.1
Sequence: TCGTGCAACTTTTCACGT
Locus tag: RoseRS_2263
Name: cyoA
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: RoseRS_2264
Name: cyoB
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: RoseRS_2265
Name: cyoC
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Locus tag: RoseRS_2266
Name: cyoD
Funciton: caa(3)-type oxidase, subunit IV
Locus tag: RoseRS_2267
Name: cyoE
Funciton: CtaG protein
cyoA
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
cyoB
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
cyoC
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
cyoD
caa(3)-type oxidase, subunit IV
cyoE
CtaG protein

Position: -116
Score: 4.7
Sequence: TTGTGAAGTTTGACACAA
Locus tag: RoseRS_0224
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
ctaB
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)

Position: -42
Score: 5.3
Sequence: TCGTGATGTGTTTCACGA
Locus tag: RoseRS_2496
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
pckA
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)

Position: -56
Score: 4.5
Sequence: TTGTGAATGTTATCACCT
Locus tag: RoseRS_3257
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: RoseRS_3256
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
bchY
Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
bchZ
Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
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