Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Chloroflexus sp. Y-400-fl

Properties
Regulator type: Transcription factor
TF locus tag: Chy400_3940
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Chloroflexia
Statistics of regulated genes:
- Genes 29
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 49 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -54
Score: 5.2
Sequence: TTGTGATATACTTCTCAT
Locus tag: Chy400_2142
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Chy400_2141
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Chy400_2140
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Chy400_2139
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Chy400_2138
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Chy400_2137
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Chy400_2136
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Chy400_2135
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Chy400_2134
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Chy400_2133
Name: nuoM1
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Chy400_2132
Name: nuoM2
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Chy400_2131
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM1
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoM2
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)

Position: -61
Score: 4.5
Sequence: CTGTGCTGTAAATCACAA
Locus tag: Chy400_1671
Name: fpr
Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
fpr
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)

Position: -250
Score: 5.2
Sequence: ACGTGATATTTATCACAA
Locus tag: Chy400_3880
Name: nuoM3
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoM3
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)

Position: -33
Score: 5.3
Sequence: TTGTGAATGATTTCACTA
Locus tag: Chy400_3620
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
ndh
NADH dehydrogenase (EC 1.6.99.3)

Position: -54
Score: 5.4
Sequence: TTGTTATCTATATCACAA
Locus tag: Chy400_0662
Name: acs
Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
acs
Acetyl-coenzyme A synthetase (EC 6.2.1.1)

Position: -63
Score: 4.8
Sequence: ATGTGGTATATTTCACAC
Locus tag: Chy400_1583
Name: Cagg_1949
Funciton: GCN5-related N-acetyltransferase
Cagg_1949
GCN5-related N-acetyltransferase

Position: -109
Score: 4
Sequence: TTGTGAAAGATCGAACAA
Locus tag: Chy400_3293
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Chy400_3292
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: Chy400_3291
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: Chy400_3290
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Chy400_3289
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Chy400_3288
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Chy400_3287
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Chy400_3286
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpB
ATP synthase A chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -123
Score: 5.7
Sequence: TTGTGGTGAATATCACAA
Locus tag: Chy400_4040
Name: hepT
Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
hepT
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)

Position: -55
Score: 4.7
Sequence: TTGTGCTACACTTCACAT
Locus tag: Chy400_3940
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
rex
Redox-sensitive transcriptional regulator Rex

Position: -34
Score: 4.1
Sequence: TCGTGAAAGAATCCACGA
Locus tag: Chy400_0034
Name: null
Funciton: hypothetical protein
Locus tag: Chy400_0033
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
hypothetical protein
ctaB
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
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