Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LiuR in Variovorax paradoxus S110

Properties
Regulator type: Transcription factor
TF locus tag: Vapar_4735
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Comamonadaceae
Statistics of regulated genes:
- Genes 6
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 59 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -115
Score: 6.6
Sequence: ATTGACGTTTACGTAAAC
Locus tag: Vapar_4735
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Vapar_4734
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Vapar_4733
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Vapar_4732
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Vapar_4731
Name: null
Funciton: peptidase M20
Locus tag: Vapar_4730
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
cah
Carbonic anhydrase (EC 4.2.1.1)
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
ivdA
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
peptidase M20
ivdC
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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