Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LiuR in Acidovorax avenae subsp. citrulli AAC00-1

Properties
Regulator type: Transcription factor
TF locus tag: Aave_4372
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Comamonadaceae
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 59 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -102
Score: 6.6
Sequence: ATTGACGTTTACGTAAAC
Position: -96
Score: 4.8
Sequence: GTTTACGTAAACGTAATG
Locus tag: Aave_4371
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Aave_4370
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Aave_4369
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Aave_4368
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Aave_4367
Name: null
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Aave_4366
Name: null
Funciton: acyltransferase 3
Locus tag: Aave_4365
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuA
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
cah
Carbonic anhydrase (EC 4.2.1.1)
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
ivdA
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
acyltransferase 3
ivdC
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -70
Score: 4.9
Sequence: ATTGACGTGCGCGTCAAC
Locus tag: Aave_4372
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

Position: -42
Score: 6.4
Sequence: ATTGACGTTTACGTCAAC
Locus tag: Aave_2867
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
paaH
3-hydroxyacyl-CoA dehydrogenase
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