Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Acidovorax sp. JS42

Properties
Regulator type: Transcription factor
TF locus tag: Ajs_2310
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Comamonadaceae
Statistics of regulated genes:
- Genes 12
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 71 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -73
Score: 5.5
Sequence: AACTGTTCAAAAATACAGAT
Position: -54
Score: 5.8
Sequence: TACTGGATTAAAAAACAGTA
Locus tag: Ajs_2310
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -85
Score: 4.9
Sequence: TGCTGGATGAAATCACAGTA
Locus tag: Ajs_1965
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Ajs_1966
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Ajs_1967
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -75
Score: 4.9
Sequence: TGCTGGATGAAATCACAGTA
Locus tag: Ajs_2429
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: Ajs_2428
Name: PF06733
Funciton: DinG family ATP-dependent helicase CPE1197
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PF06733
DinG family ATP-dependent helicase CPE1197

Position: -35
Score: 4.5
Sequence: TCCTGGTTTTATATCCAGCA
Locus tag: Ajs_1014
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Ajs_1015
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: Ajs_1016
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
yjbJ
Conserved hypothetical protein, similar to lytic transglycosylase
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -23
Score: 4.9
Sequence: TGCTGGATGAAATCACAGTA
Locus tag: Ajs_2803
Name: PF04055
Funciton: DNA repair photolyase
PF04055
DNA repair photolyase

Position: -87
Score: 4.3
Sequence: TACTGTTCAAGCATCCAGCC
Locus tag: Ajs_4001
Name: recA
Funciton: Recombinase A
Locus tag: Ajs_4002
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX
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