Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Aeromonas hydrophila subsp. hydrophila ATCC 7966

Properties
Regulator type: Transcription factor
TF locus tag: AHA_0183
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes 13
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 77 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -68
Score: 5.9
Sequence: TACTGTATGAATAGACAGTA
Locus tag: AHA_3716
Name: recA
Funciton: Recombinase A
Locus tag: AHA_3715
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -72
Score: 5.2
Sequence: ACCTGTCTATTCATCCAGTA
Locus tag: AHA_3955
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -74
Score: 5.1
Sequence: TGCTGGATACTTATCCAGTT
Locus tag: AHA_3648
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: AHA_3647
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -35
Score: 5
Sequence: ATCTGGACATATTTACAGTG
Locus tag: AHA_0284
Name: recG
Funciton: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
recG
ATP-dependent DNA helicase RecG (EC 3.6.1.-)

Position: -34
Score: 5.8
Sequence: TACTGTTCACATATACAGTA
Locus tag: AHA_4047
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB
DNA topoisomerase III (EC 5.99.1.2)

Position: -49
Score: 5.3
Sequence: CACTGTATATACTGCCAGTG
Position: -29
Score: 5.3
Sequence: TGCTGTATAAAAAGACAGGT
Locus tag: AHA_0183
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -52
Score: 4.8
Sequence: CACTGTATGAACGTACAATA
Locus tag: AHA_2107
Name: polB
Funciton: DNA polymerase II (EC 2.7.7.7)
polB
DNA polymerase II (EC 2.7.7.7)

Position: -26
Score: 5.4
Sequence: GCCTGTATAAATAAACAGGA
Locus tag: AHA_0220
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -67
Score: 5.6
Sequence: TACTGTATGGAAAACCAGTA
Position: -45
Score: 5.8
Sequence: TACTGGATACATACACAGTA
Locus tag: AHA_2986
Name: recN
Funciton: DNA repair protein RecN
recN
DNA repair protein RecN

Position: -53
Score: 4.7
Sequence: TACTGTATATCCATACATAT
Locus tag: AHA_2277
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
yebG
SOS regulon DNA damage-inducible protein

Position: -22
Score: 4.9
Sequence: ACCTGTTTATTCGTACAGTG
Locus tag: AHA_1145
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD