Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of KdgR in Actinobacillus succinogenes 130Z

Properties
Regulator type: Transcription factor
TF locus tag: Asuc_1475
Regulator family: IclR
Regulation mode: repressor
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Regulog: KdgR - Pasteurellales
Statistics of regulated genes:
- Genes 13
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -117
Score: 5.8
Sequence: TATTAAAATAATGTTTCAAAA
Position: -73
Score: 5.2
Sequence: AAATAAAATTGTGTTATATTA
Locus tag: Asuc_1469
Name: pelX
Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
pelX
Exopolygalacturonate lyase (EC 4.2.2.9)

Position: -102
Score: 5
Sequence: ATTAAAAATAAAATTTTGTTT
Position: -97
Score: 5.8
Sequence: AAATAAAATTTTGTTTCAAAA
Locus tag: Asuc_1468
Name: togX
Funciton: predicted oligogalacturonate transporter
Locus tag: Asuc_1467
Name: ogl
Funciton: Oligogalacturonate lyase (EC 4.2.2.6)
togX
predicted oligogalacturonate transporter
ogl
Oligogalacturonate lyase (EC 4.2.2.6)

Position: -153
Score: 5.5
Sequence: ATTCAAAACATAATTTCATTT
Locus tag: Asuc_1923
Name: oglP
Funciton: predicted oligogalacturonate TRAP transporter, substrate-binding subunit
Locus tag: Asuc_1922
Name: oglQ
Funciton: predicted oligogalacturonate TRAP transporter, small transmembrane subunit
Locus tag: Asuc_1921
Name: oglM
Funciton: predicted oligogalacturonate TRAP transporter, large transmembrane subunit
oglP
predicted oligogalacturonate TRAP transporter, substrate-binding subunit
oglQ
predicted oligogalacturonate TRAP transporter, small transmembrane subunit
oglM
predicted oligogalacturonate TRAP transporter, large transmembrane subunit

Position: -148
Score: 5.4
Sequence: TTTTAAAACCATATTTCAATT
Locus tag: Asuc_1477
Name: oglO
Funciton: predicted oligogalacturonate-specific outer membrane porin
oglO
predicted oligogalacturonate-specific outer membrane porin

Position: -122
Score: 5.4
Sequence: AATTGAAATTGTATTTCAGAA
Locus tag: Asuc_1474
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Locus tag: Asuc_1473
Name: spiX
Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: Asuc_1472
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: Asuc_1471
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: Asuc_1470
Name: kdgF
Funciton: Pectin degradation protein
kduD
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
spiX
predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kdgK
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
kdgF
Pectin degradation protein

Position: -126
Score: 5.4
Sequence: TTCTGAAATACAATTTCAATT
Locus tag: Asuc_1475
Name: kdgR
Funciton: 2-keto-3-deoxygluconate regulator, IclR family
kdgR
2-keto-3-deoxygluconate regulator, IclR family
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