Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtrC in Comamonas testosteroni KF-1

Properties
Regulator type: Transcription factor
TF locus tag: CtesDRAFT_0728
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes 11
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 52 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -261
Score: 5.9
Sequence: TGCACCACATTGGTGCA
Position: -238
Score: 4.7
Sequence: TTCGCCAAGATGGTGCA
Locus tag: CtesDRAFT_0725
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -288
Score: 4.9
Sequence: ATCACCTGTTTGGTGCA
Position: -228
Score: 5.6
Sequence: CGCACCATCTTGGTGCA
Locus tag: CtesDRAFT_4075
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: CtesDRAFT_4074
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: CtesDRAFT_4073
Name: amtB
Funciton: Ammonium transporter
CHP02001
Conserved hypothetical protein CHP02001
glnK
Nitrogen regulatory protein P-II
amtB
Ammonium transporter

Position: -219
Score: 4.8
Sequence: TGCACAAAAGCAGTGCA
Locus tag: CtesDRAFT_4526
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: CtesDRAFT_4594
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: CtesDRAFT_4527
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: CtesDRAFT_4528
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nasD
Nitrite reductase, large subunit (EC 1.7.1.4)
nasE
Nitrite reductase, small subunit (EC 1.7.1.4)
nasA
Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -232
Score: 4.5
Sequence: TGCACCAAATATGGGCC
Locus tag: CtesDRAFT_4523
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: CtesDRAFT_4524
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: CtesDRAFT_4525
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA
Nitrate ABC transporter, substrate-binding component
nrtB
Nitrate ABC transporter, permease component
nrtC
Nitrate ABC transporter, ATP-binding component
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