Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtrC in Acidovorax sp. JS42

Properties
Regulator type: Transcription factor
TF locus tag: Ajs_1192
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes 14
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 52 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -155
Score: 5
Sequence: TGCACCAGGCTGGTGCG
Locus tag: Ajs_0162
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Ajs_0163
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Ajs_0164
Name: amtB
Funciton: Ammonium transporter
CHP02001
Conserved hypothetical protein CHP02001
glnK
Nitrogen regulatory protein P-II
amtB
Ammonium transporter

Position: -206
Score: 5.7
Sequence: TGCACCAAACGGGTGCA
Position: -134
Score: 5.1
Sequence: TGCACGCGTTTGGTGCG
Locus tag: Ajs_1189
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Ajs_1190
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Ajs_1191
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Ajs_1192
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA
Glutamine synthetase type I (EC 6.3.1.2)
ntrZ
Conserved hypothetical signal peptide protein
ntrB
putative nitrogen regulation protein NR(II)
ntrC
Nitrogen regulation protein NR(I), Fis family

Position: -120
Score: 4.6
Sequence: GGCACCACTGCGGTGCA
Locus tag: Ajs_2842
Name: ybiB
Funciton: Conserved hypothetical protein
Locus tag: Ajs_2843
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
ybiB
Conserved hypothetical protein
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -314
Score: 5
Sequence: TGCACAAATGCGGTGCA
Locus tag: Ajs_2831
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Ajs_2832
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Ajs_2833
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA
Nitrate ABC transporter, substrate-binding component
nrtB
Nitrate ABC transporter, permease component
nrtC
Nitrate ABC transporter, ATP-binding component

Position: -328
Score: 4.5
Sequence: TGCACCACGGCGGTGCG
Locus tag: Ajs_2839
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Ajs_2840
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nasD
Nitrite reductase, large subunit (EC 1.7.1.4)
nasE
Nitrite reductase, small subunit (EC 1.7.1.4)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD