Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtrC in Acidovorax avenae subsp. citrulli AAC00-1

Properties
Regulator type: Transcription factor
TF locus tag: Aave_1445
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes 11
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 52 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -207
Score: 5.6
Sequence: TGCACGATTTTGGTGCG
Position: -184
Score: 4.9
Sequence: GGCCCCGAATTGGTGCG
Locus tag: Aave_1442
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Aave_1443
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Aave_1444
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Aave_1445
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA
Glutamine synthetase type I (EC 6.3.1.2)
ntrZ
Conserved hypothetical signal peptide protein
ntrB
putative nitrogen regulation protein NR(II)
ntrC
Nitrogen regulation protein NR(I), Fis family

Position: -180
Score: 5.1
Sequence: CGCACCATTCGGGTGCG
Position: -108
Score: 4.6
Sequence: CGCACCCATTCGGAGCG
Locus tag: Aave_0232
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Aave_0233
Name: glnK
Funciton: Nitrogen regulatory protein P-II
CHP02001
Conserved hypothetical protein CHP02001
glnK
Nitrogen regulatory protein P-II

Position: -331
Score: 4.4
Sequence: TGCACCGAAGCGGTTCA
Locus tag: Aave_2107
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Aave_2106
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nasD
Nitrite reductase, large subunit (EC 1.7.1.4)
nasE
Nitrite reductase, small subunit (EC 1.7.1.4)

Position: -282
Score: 4.8
Sequence: CGCACGAAGAGGGTGCA
Locus tag: Aave_2147
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Aave_2146
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Aave_2145
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA
Nitrate ABC transporter, substrate-binding component
nrtB
Nitrate ABC transporter, permease component
nrtC
Nitrate ABC transporter, ATP-binding component
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