Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of SiaR in Psychromonas sp. CNPT3

Properties
Regulator type: Transcription factor
TF locus tag: PCNPT3_00805
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Regulog: SiaR - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes 10
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -188
Score: 4.4
Sequence: AATGGAGCTCAACTCCAAG
Position: -93
Score: 4.7
Sequence: GTTGAAGTAAAGCTCCGTT
Locus tag: PCNPT3_02946
Name: siaP
Funciton: Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
Locus tag: PCNPT3_02951
Name: siaS
Funciton: TRAP-type transport system, small permease component, N-acetylneuraminate transporter
Locus tag: PCNPT3_02956
Name: siaT
Funciton: TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
siaP
Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
siaS
TRAP-type transport system, small permease component, N-acetylneuraminate transporter
siaT
TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter

Position: -76
Score: 5.5
Sequence: ATTGAAGTTTTACTCCAAA
Position: -18
Score: 5.3
Sequence: TTTGGAGTTTAACTACATA
Locus tag: PCNPT3_00800
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: PCNPT3_00795
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: PCNPT3_00790
Name: yhcH
Funciton: Uncharacterized protein yhcH
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)
yhcH
Uncharacterized protein yhcH

Position: -215
Score: 5.2
Sequence: ATTGAAGTTTCACTCCAAA
Position: -157
Score: 5
Sequence: TTTGGAGTTTAGCTACATA
Locus tag: PCNPT3_02205
Name: nanP
Funciton: Sialic acid transporter
nanP
Sialic acid transporter

Position: -90
Score: 4.2
Sequence: AAAGAAATATTTTTTCATT
Locus tag: PCNPT3_09404
Name: nanM
Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
nanM
Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase

Position: -39
Score: 4.7
Sequence: AACGGAGTTTAATTTCTCT
Locus tag: PCNPT3_00810
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)

Position: -89
Score: 4.3
Sequence: AGTAAAATTAAACTTTATT
Locus tag: PCNPT3_13193
Name: glmU
Funciton: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
glmU
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD