Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of SiaR in Haemophilus parasuis SH0165

Properties
Regulator type: Transcription factor
TF locus tag: HAPS_0407
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Regulog: SiaR - Pasteurellales
Statistics of regulated genes:
- Genes 7
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -42
Score: 5.3
Sequence: AATGAAGTTTTATTTCAAA
Locus tag: HAPS_2072
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: HAPS_2071
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)

Position: -153
Score: 4.4
Sequence: AATCAAGTAAATTGTGATT
Position: -80
Score: 4.8
Sequence: TATGGAGTATATTTTCTTT
Locus tag: HAPS_0408
Name: yhcH
Funciton: Uncharacterized protein yhcH
Locus tag: HAPS_0407
Name: siaR
Funciton: Sialic acid utilization regulator, RpiR family
Locus tag: HAPS_0406
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
yhcH
Uncharacterized protein yhcH
siaR
Sialic acid utilization regulator, RpiR family
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)

Position: -191
Score: 4.1
Sequence: AATCGATTAAAACTCGTTT
Position: -43
Score: 4.6
Sequence: TTTGGAGTAAATTTTCTTT
Locus tag: HAPS_1216
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: HAPS_1215
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD