Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of SiaR in Vibrio fischeri ES114

Properties
Regulator type: Transcription factor
TF locus tag: VF_0664
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Regulog: SiaR - Vibrionales
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -51
Score: 4.9
Sequence: TTCGGAGTGTAACTCCAAT
Locus tag: VF_0665
Name: nagA2
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagA2
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)

Position: -195
Score: 4.9
Sequence: ATTGGAGTTACACTCCGAA
Position: -43
Score: 5.1
Sequence: ATTGAAGTATTACTCCGTT
Locus tag: VF_0666
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: VF_0667
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: VF_0668
Name: nanT
Funciton: Sialic acid transporter (permease) NanT
Locus tag: VF_0669
Name: yhcH
Funciton: Uncharacterized protein yhcH
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)
nanT
Sialic acid transporter (permease) NanT
yhcH
Uncharacterized protein yhcH

Position: -80
Score: 5.3
Sequence: TATGGAGTTACACTTCACA
Locus tag: VF_0664
Name: siaR
Funciton: Sialic acid utilization regulator, RpiR family
siaR
Sialic acid utilization regulator, RpiR family

Position: -91
Score: 5
Sequence: AATGAAACTTTACTCCATA
Position: -42
Score: 5.4
Sequence: AATGAAGAATAACTTCATT
Locus tag: VF_0663
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)

Position: -116
Score: 4.9
Sequence: CTTGAAGTTAAACTCCGTA
Position: -88
Score: 5.6
Sequence: TTTGGAGTATAACTTCATA
Locus tag: VF_A0786
Name: ptsG2
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
ptsG2
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
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