Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of IscR in Silicibacter pomeroyi DSS-3

Properties
Regulator type: Transcription factor
TF locus tag: SPO2025
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog: IscR - Rhodobacterales
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -141
Score: 4.1
Sequence: CTTGACGAATTCCCTCGGG
Locus tag: SPO2025
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR, Rrf2 family
iscR
Iron-sulfur cluster regulator IscR, Rrf2 family

Position: -99
Score: 4.6
Sequence: GGCGACAAAAATAGTCAGG
Locus tag: SPO0789
Name: hemP
Funciton: Hemin uptake protein HemP
Locus tag: SPO0790
Name: null
Funciton: hypothetical protein
hemP
Hemin uptake protein HemP
hypothetical protein

Position: -88
Score: 5.2
Sequence: ACTGACAAATTTAGTCAGA
Locus tag: SPO0086
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: SPO0087
Name: hmuX
Funciton: hypothetical porin
Locus tag: SPO0088
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: SPO0089
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: SPO0090
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA
Iron-regulated protein A precursor
hmuX
hypothetical porin
COG3488
Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
COG3489
Predicted periplasmic lipoprotein
COG3490
Uncharacterised conserved protein UCP028101

Position: -27
Score: 4.1
Sequence: TCCGACTAAACTGGTCGAT
Locus tag: SPO3288
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
fbpB
Ferric iron ABC transporter, permease protein

Position: -50
Score: 4.7
Sequence: CCCGACTGAAATAATCAGT
Locus tag: SPO3287
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
fbpA
Ferric iron ABC transporter, iron-binding protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD