Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of IscR in Sulfitobacter sp. EE-36

Properties
Regulator type: Transcription factor
TF locus tag: EE36_14302
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog: IscR - Rhodobacterales
Statistics of regulated genes:
- Genes 35
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -82
Score: 4.3
Sequence: CTTGATTGTTTTTATCAGC
Locus tag: EE36_10454
Name: EE36_10454
Funciton: Ferrichrome-iron receptor
EE36_10454
Ferrichrome-iron receptor

Position: -167
Score: 4.4
Sequence: GTTGATTGTTAAAGTCAGG
Locus tag: EE36_12993
Name: Mlr1156
Funciton: Mlr1156 protein
Locus tag: EE36_12998
Name: exbB
Funciton: Ferric siderophore transport system, biopolymer transport protein ExbB
Locus tag: EE36_13003
Name: exbD1
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: EE36_13008
Name: exbD2
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: EE36_13013
Name: tonB
Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
Mlr1156
Mlr1156 protein
exbB
Ferric siderophore transport system, biopolymer transport protein ExbB
exbD1
Ferric siderophore transport system, periplasmic binding protein ExbD
exbD2
Ferric siderophore transport system, periplasmic binding protein ExbD
tonB
Ferric siderophore transport system, periplasmic binding protein TonB

Position: -256
Score: 4.3
Sequence: GTTGACACTTTTAGTCGGT
Locus tag: EE36_01535
Name: hmuR
Funciton: TonB-dependent hemin , ferrichrome receptor
hmuR
TonB-dependent hemin , ferrichrome receptor

Position: -251
Score: 3.8
Sequence: TCTTACTTTATTTATAGGG
Position: -72
Score: 3.7
Sequence: CCTTACTATTTCAGTTTGA
Position: -30
Score: 4.9
Sequence: TCCGACTAAAACAGTAAGG
Locus tag: EE36_01780
Name: fhuA2
Funciton: Ferrichrome-iron receptor
Locus tag: EE36_01775
Name: null
Funciton: AmpG permease
Locus tag: EE36_01770
Name: mxcB2
Funciton: Siderophore-interacting protein
fhuA2
Ferrichrome-iron receptor
AmpG permease
mxcB2
Siderophore-interacting protein

Position: -113
Score: 5.2
Sequence: TCCGAGTAAATTTGTCAGA
Locus tag: EE36_08018
Name: araX
Funciton: Iron-regulated transcriptional regulator, AraC family
araX
Iron-regulated transcriptional regulator, AraC family

Position: -44
Score: 4.6
Sequence: ACTGAGTTAAATACTCGGA
Locus tag: EE36_08023
Name: fhuA
Funciton: Ferric hydroxamate outer membrane receptor FhuA
Locus tag: EE36_08028
Name: fhuD
Funciton: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
Locus tag: EE36_08033
Name: fhuB
Funciton: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
Locus tag: EE36_08038
Name: fhuC
Funciton: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC
fhuA
Ferric hydroxamate outer membrane receptor FhuA
fhuD
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD
fhuB
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB
fhuC
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC

Position: -32
Score: 4.1
Sequence: CCCGAGCGAATTGATCGGA
Locus tag: EE36_16412
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
fbpC
Ferric iron ABC transporter, ATP-binding protein

Position: -28
Score: 5.1
Sequence: TCCGACTGAATTAGTCGAA
Locus tag: EE36_05618
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
fbpB
Ferric iron ABC transporter, permease protein

Position: -140
Score: 4.8
Sequence: TCTTACTAAAATTGTCGGG
Locus tag: EE36_02713
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: EE36_02708
Name: hmuX
Funciton: hypothetical porin
Locus tag: EE36_02703
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: EE36_02698
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: EE36_02693
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA
Iron-regulated protein A precursor
hmuX
hypothetical porin
COG3488
Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
COG3489
Predicted periplasmic lipoprotein
COG3490
Uncharacterised conserved protein UCP028101

Position: -274
Score: 5
Sequence: TCCGACTAAAACTGTCGGA
Position: -247
Score: 4.1
Sequence: CCCTATAATTTCAATCAGG
Locus tag: EE36_10464
Name: hemP
Funciton: Hemin uptake protein HemP
Locus tag: EE36_10459
Name: null
Funciton: hypothetical protein
hemP
Hemin uptake protein HemP
hypothetical protein

Position: -136
Score: 3.6
Sequence: GTTGACGAATTCGCTAGGG
Locus tag: EE36_14302
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR, Rrf2 family
Locus tag: EE36_14307
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: EE36_14312
Name: sufB
Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: EE36_14317
Name: null
Funciton: hypothetical protein
Locus tag: EE36_14322
Name: Jann_2361
Funciton: ExoV domain protein
Locus tag: EE36_14327
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: EE36_14332
Name: sufD
Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: EE36_14337
Name: RSP_0433
Funciton: hypothetical protein
Locus tag: EE36_14342
Name: null
Funciton: hypothetical protein
Locus tag: EE36_14347
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
iscR
Iron-sulfur cluster regulator IscR, Rrf2 family
iscS
Cysteine desulfurase (EC 2.8.1.7)
sufB
Iron-sulfur cluster assembly protein SufB
hypothetical protein
Jann_2361
ExoV domain protein
sufC
Iron-sulfur cluster assembly ATPase protein SufC
sufD
Iron-sulfur cluster assembly protein SufD
RSP_0433
hypothetical protein
hypothetical protein
sufS
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily

Position: -91
Score: 4.4
Sequence: TCCTATTAATTCACTCAAG
Position: -42
Score: 3.7
Sequence: TCTTACTGTTTTTATAGGT
Locus tag: EE36_05613
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
fbpA
Ferric iron ABC transporter, iron-binding protein
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