Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NagR in Xanthomonas campestris pv. campestris str. ATCC 33913

Properties
Regulator type: Transcription factor
TF locus tag: XCC3412
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagR - Xanthomonadales
Statistics of regulated genes:
- Genes 7
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -340
Score: 5.6
Sequence: GCTGATAACGTTGTCAGC
Locus tag: XCC3408
Name: nixA
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
nixA
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor

Position: -355
Score: 6
Sequence: GTTGACAACGCTGTCAAC
Locus tag: XCC2887
Name: nixD
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
nixD
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor

Position: -161
Score: 5.7
Sequence: GTTGACACCGATGTCATC
Locus tag: XCC0531
Name: nixB
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
nixB
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor

Position: -178
Score: 5.4
Sequence: GATGACAACGATGGCACT
Locus tag: XCC3045
Name: naxA
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
naxA
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor

Position: -81
Score: 5.7
Sequence: GCTGACAACGTTGTCTAC
Locus tag: XCC2886
Name: nagK2
Funciton: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
nagK2
Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)

Position: -83
Score: 6.2
Sequence: ATTGACAGCGTTGTCATC
Locus tag: XCC2943
Name: nagK2
Funciton: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
Locus tag: XCC2944
Name: nixC
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
nagK2
Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
nixC
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD